Difference between revisions of "CHC T00008422001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene CHC_T00008422001 == * left end position: ** 262956 * transcription direction: ** POSITIVE * right end position: ** 267122 * centisome position: ** 85...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] ==
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== Gene CHC_T00008422001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 262956
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** POSITIVE
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* right end position:
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** 267122
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* centisome position:
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** 85.3756   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN1F-20]]
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** 1 [[CPD0-2244]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD0-2123]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 (S)-3-hydroxydecanoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 3-oxodecanoyl-CoA[c] '''+''' 1 NADH[c]
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== Pathways associated ==
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* [[PWY-5531]]
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== Genes associated with this reaction  ==
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* [[CHLOROPHYLL-SYN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7159]]
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* [[CHC_T00009422001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008882001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00009349001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00008557001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=262956}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31188 31188]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=267122}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04743 R04743]
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{{#set: centisome position=85.3756    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN1F-20}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: pathway associated=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
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{{#set: gene associated=CHC_T00009422001_1|CHC_T00008882001_1|CHC_T00009349001_1|CHC_T00008557001_1}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Latest revision as of 15:04, 23 May 2018

Gene CHC_T00008422001

  • left end position:
    • 262956
  • transcription direction:
    • POSITIVE
  • right end position:
    • 267122
  • centisome position:
    • 85.3756
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008422001&oldid=13116"