Difference between revisions of "PHOSPHOMEVALONATE-KINASE-RXN"

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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7669 RXN-7669] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOMEVALONATE-KINASE-RXN PHOSPHOMEVALONATE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** 1,4-alpha-Glucan branching enzyme
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.18 EC-2.4.1.18]
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** [http://enzyme.expasy.org/EC/2.7.4.2 EC-2.7.4.2]
 
* Synonym(s):
 
* Synonym(s):
−
** Amylo-(1,4-1,6)-transglycosylase
 
−
** Amylo-(1,4 to 1,6)transglucosidase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[POLY-GLUCOSYLATED-GLYCOGENINS]][c] '''=>''' 1 [[Glycogens]][c]
+
** 1 [[CPD-499]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-641]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a glucosylated glycogenin[c] '''=>''' 1 a glycogen[c]
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** 1 (R)-mevalonate 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 (R)-mevalonate diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00008662001]]
 
−
** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[CHC_T00008662001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5067]], glycogen biosynthesis II (from UDP-D-Glucose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5067 PWY-5067]
+
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[gap-filling]]
−
** [[pantograph]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[galdieria.sulphuraria]]
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*** Tool: [[meneco]]
−
* [[annotation]]:
+
**** Comment: [[added for gapfilling]]
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
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* RHEA:
−
{{#set: common name=1,4-alpha-Glucan branching enzyme}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16341 16341]
−
{{#set: ec number=EC-2.4.1.18}}
+
* UNIPROT:
−
{{#set: common name=Amylo-(1,4-1,6)-transglycosylase|Amylo-(1,4 to 1,6)transglucosidase}}
+
** [http://www.uniprot.org/uniprot/P24521 P24521]
−
{{#set: gene associated=CHC_T00008662001|CHC_T00008662001_1}}
+
* LIGAND-RXN:
−
{{#set: in pathway=PWY-5067}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03245 R03245]
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{{#set: reconstruction category=orthology}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-2.7.4.2}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: in pathway=PWY-922|PWY-7391}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=original_genome}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 15:23, 9 January 2019

Reaction PHOSPHOMEVALONATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (R)-mevalonate 5-phosphate[c] + 1 ATP[c] <=> 1 ADP[c] + 1 (R)-mevalonate diphosphate[c]

Genes associated with this reaction

Pathways

  • PWY-922, mevalonate pathway I: PWY-922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




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