Difference between revisions of "CENTFERM-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7695 CPD-7695] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7695 CPD-7695] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] ==
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* smiles:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC2(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(OC1(OC(CO)C(O)C(O)C(NC(=O)C)1))C(CO)O2))([O-])=O)C)C)C)C)C)C)C
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* inchi key:
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** InChIKey=ULXTYUPMJXVUHQ-OVTFQNCVSA-K
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* common name:
 
* common name:
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** ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
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** pyruvate fermentation to butanoate
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* molecular weight:
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* taxonomic range:
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** 1873.228   
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* Synonym(s):
 
* Synonym(s):
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** lipid II
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** central fermentation pathway
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** undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)-N-acetyl-β-D-glucosamine
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** acetobutylicum fermentation
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** undecaprenoldiphospho-β-D-GlcNAc-(1->4)-MurNAc(oyl-L-Ala-γ-D-Glu-L-Lys-D-Ala-D-Ala)-
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** pyruvate fermentation to butyrate
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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== Reaction(s) known to produce the compound ==
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'''4''' reactions found over '''7''' reactions in the full pathway
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* [[RXN-8976]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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== Reaction(s) of unknown directionality ==
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** 3 associated gene(s):
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*** [[CHC_T00008981001_1]]
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*** [[CHC_T00009349001_1]]
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*** [[CHC_T00008981001]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PYRUFLAVREDUCT-RXN]]
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** 9 associated gene(s):
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*** [[CHC_T00008442001_1]]
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*** [[CHC_T00003376001_1]]
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*** [[CHC_T00001730001_1]]
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*** [[CHC_T00001454001_1]]
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*** [[CHC_T00003402001_1]]
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*** [[CHC_T00000866001_1]]
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*** [[CHC_T00009061001_1]]
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*** [[CHC_T00008758001_1]]
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*** [[CHC_T00000865001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-11662]]
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** 4 associated gene(s):
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*** [[CHC_T00008882001_1]]
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*** [[CHC_T00009422001_1]]
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*** [[CHC_T00008557001_1]]
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*** [[CHC_T00009349001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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* [[RXN-11667]]
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** 3 associated gene(s):
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*** [[CHC_T00008882001_1]]
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*** [[CHC_T00009110001_1]]
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*** [[CHC_T00009349001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRATE-KINASE-RXN BUTYRATE-KINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATE-BUTYRYLTRANSFERASE-RXN PHOSPHATE-BUTYRYLTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: common name=pyruvate fermentation to butanoate}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878551 46878551]
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{{#set: taxonomic range=TAX-1224}}
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* LIGAND-CPD:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05889 C05889]
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{{#set: common name=central fermentation pathway|acetobutylicum fermentation|pyruvate fermentation to butyrate}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC2(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(OC1(OC(CO)C(O)C(O)C(NC(=O)C)1))C(CO)O2))([O-])=O)C)C)C)C)C)C)C}}
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{{#set: reaction found=4}}
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{{#set: inchi key=InChIKey=ULXTYUPMJXVUHQ-OVTFQNCVSA-K}}
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{{#set: total reaction=7}}
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{{#set: common name=ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine}}
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{{#set: completion rate=56.99999999999999}}
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{{#set: molecular weight=1873.228    }}
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{{#set: common name=lipid II|undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)-N-acetyl-β-D-glucosamine|undecaprenoldiphospho-β-D-GlcNAc-(1->4)-MurNAc(oyl-L-Ala-γ-D-Glu-L-Lys-D-Ala-D-Ala)-}}
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{{#set: produced by=RXN-8976}}
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Latest revision as of 16:16, 9 January 2019

Pathway CENTFERM-PWY

  • common name:
    • pyruvate fermentation to butanoate
  • taxonomic range:
  • Synonym(s):
    • central fermentation pathway
    • acetobutylicum fermentation
    • pyruvate fermentation to butyrate

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CENTFERM-PWY&oldid=21503"