Difference between revisions of "PWY-922"

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(Created page with "Category:Gene == Gene CHC_T00008325001 == * left end position: ** 108341 * transcription direction: ** NEGATIVE * right end position: ** 109390 * centisome position: ** 47...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene CHC_T00008325001 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] ==
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* left end position:
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* common name:
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** 108341
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** mevalonate pathway I
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* transcription direction:
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* taxonomic range:
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** NEGATIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** 109390
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* centisome position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 47.22778   
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* Synonym(s):
 
* Synonym(s):
 +
** isoprenoid pathway
 +
** MVA pathway
 +
** isopentenyl diphosphate biosynthesis
 +
** dimethylallyl diphosphate biosynthesis
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN]]
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'''7''' reactions found over '''7''' reactions in the full pathway
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** original_genome
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* [[1.1.1.34-RXN]]
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***automated-name-match
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** 1 associated gene(s):
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* [[RXN-15043]]
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*** [[CHC_T00006657001_1]]
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** original_genome
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** 1 reconstruction source(s) associated:
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***automated-name-match
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-16025]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** original_genome
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** 3 associated gene(s):
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***automated-name-match
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*** [[CHC_T00008981001_1]]
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* [[RXN-16032]]
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*** [[CHC_T00009349001_1]]
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** original_genome
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*** [[CHC_T00008981001]]
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***automated-name-match
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** 4 reconstruction source(s) associated:
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* [[RXN-16066]]
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*** [[orthology-galdieria.sulphuraria]]
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** original_genome
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*** [[annotation-original_genome]]
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***automated-name-match
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*** [[orthology-arabidopsis_thaliana]]
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* [[RXN-16067]]
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*** [[orthology-ectocarpus_siliculosus]]
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** original_genome
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* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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***automated-name-match
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** 0 associated gene:
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* [[RXN-16076]]
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** 1 reconstruction source(s) associated:
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** original_genome
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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***automated-name-match
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* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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* [[RXN-16077]]
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** 1 associated gene(s):
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** original_genome
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*** [[CHC_T00008149001_1]]
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***automated-name-match
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** 3 reconstruction source(s) associated:
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* [[RXN-16118]]
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*** [[orthology-galdieria.sulphuraria]]
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** original_genome
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*** [[orthology-arabidopsis_thaliana]]
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***automated-name-match
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-1623]]
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* [[IPPISOM-RXN]]
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** original_genome
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** 2 associated gene(s):
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***automated-name-match
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*** [[CHC_T00001581001_1]]
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* [[RXN-17008]]
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*** [[CHC_T00006126001_1]]
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** original_genome
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** 3 reconstruction source(s) associated:
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***automated-name-match
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-17009]]
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*** [[orthology-arabidopsis_thaliana]]
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** original_genome
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*** [[orthology-ectocarpus_siliculosus]]
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***automated-name-match
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* [[MEVALONATE-KINASE-RXN]]
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* [[RXN-17010]]
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** 0 associated gene:
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** original_genome
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** 1 reconstruction source(s) associated:
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***automated-name-match
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-17011]]
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* [[PHOSPHOMEVALONATE-KINASE-RXN]]
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** original_genome
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** 0 associated gene:
−
***automated-name-match
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** 1 reconstruction source(s) associated:
−
* [[RXN-17012]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** original_genome
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== Reaction(s) not found ==
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***automated-name-match
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−
* [[RXN-17013]]
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−
** original_genome
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−
***automated-name-match
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−
* [[RXN-17014]]
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** original_genome
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−
***automated-name-match
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−
* [[RXN-17015]]
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** original_genome
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−
***automated-name-match
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−
* [[RXN-17019]]
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** original_genome
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−
***automated-name-match
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−
* [[RXN-17020]]
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−
** original_genome
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−
***automated-name-match
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* [[RXN-17021]]
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−
** original_genome
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−
***automated-name-match
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−
* [[RXN-17022]]
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−
** original_genome
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−
***automated-name-match
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−
* [[RXN-17023]]
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** original_genome
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***automated-name-match
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−
* [[RXN-17024]]
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** original_genome
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***automated-name-match
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* [[RXN-17729]]
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** original_genome
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−
***automated-name-match
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−
* [[RXN0-5514]]
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** original_genome
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***automated-name-match
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* [[RXN0-6705]]
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** original_genome
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***automated-name-match
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−
== Pathways associated ==
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−
* [[TRIGLSYN-PWY]]
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−
* [[PWY-7411]]
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* [[PWY-7589]]
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* [[PWY-7782]]
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−
* [[PWY-5667]]
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−
* [[PWY0-1319]]
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−
* [[PWY-7417]]
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−
* [[PWY-5981]]
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−
* [[PWY-7587]]
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−
* [[PWY-6453]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=108341}}
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* ARACYC:
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{{#set: transcription direction=NEGATIVE}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-922 PWY-922]
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{{#set: right end position=109390}}
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{{#set: common name=mevalonate pathway I}}
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{{#set: centisome position=47.22778    }}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: reaction associated=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN|RXN-15043|RXN-16025|RXN-16032|RXN-16066|RXN-16067|RXN-16076|RXN-16077|RXN-16118|RXN-1623|RXN-17008|RXN-17009|RXN-17010|RXN-17011|RXN-17012|RXN-17013|RXN-17014|RXN-17015|RXN-17019|RXN-17020|RXN-17021|RXN-17022|RXN-17023|RXN-17024|RXN-17729|RXN0-5514|RXN0-6705}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: pathway associated=TRIGLSYN-PWY|PWY-7411|PWY-7589|PWY-7782|PWY-5667|PWY0-1319|PWY-7417|PWY-5981|PWY-7587|PWY-6453}}
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{{#set: taxonomic range=TAX-4751}}
 +
{{#set: taxonomic range=TAX-2}}
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{{#set: taxonomic range=TAX-33090}}
 +
{{#set: common name=isoprenoid pathway|MVA pathway|isopentenyl diphosphate biosynthesis|dimethylallyl diphosphate biosynthesis}}
 +
{{#set: reaction found=7}}
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{{#set: total reaction=7}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 16:42, 9 January 2019

Pathway PWY-922

  • common name:
    • mevalonate pathway I
  • taxonomic range:
  • Synonym(s):
    • isoprenoid pathway
    • MVA pathway
    • isopentenyl diphosphate biosynthesis
    • dimethylallyl diphosphate biosynthesis

Reaction(s) found

7 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links






Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-922&oldid=22138"