Difference between revisions of "RXN-8630"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN] == * direction: ** L...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8630 RXN-8630] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** succinate dehydrogenase (Complex II) flavoprotein subunit precursor
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
+
** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUC]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[Ubiquinols]][c]
+
** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[ACETONE]][c] '''=>''' 1 [[ACETOL]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate[c] '''+''' 1 a ubiquinone[c] '''=>''' 1 fumarate[c] '''+''' 1 an ubiquinol[c]
+
** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''+''' 1 acetone[c] '''=>''' 1 acetol[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00001817001_1]]
+
* Gene: [[CHC_T00008302001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00008943001]]
+
* Gene: [[CHC_T00008799001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[CHC_T00009144001_1]]
−
* [[CHC_T00007286001_1]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00006990001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008943001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00007584001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1353]], succinate to cytochrome bd oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1353 PWY0-1353]
+
* [[PWY-5451]], acetone degradation I (to methylglyoxal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5451 PWY-5451]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-3781]], aerobic respiration I (cytochrome c): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3781 PWY-3781]
+
* [[PWY-7466]], acetone degradation III (to propane-1,2-diol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7466 PWY-7466]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY0-1329]], succinate to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1329 PWY0-1329]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13713 13713]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02164 R02164]
 
−
* PIR:
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T50081 T50081]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46878 T46878]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T41753 T41753]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T37633 T37633]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11245 T11245]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11229 T11229]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11218 T11218]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78180 S78180]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78179 S78179]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78178 S78178]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74810 S74810]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62756 S62756]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62755 S62755]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S59115 S59115]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S59114 S59114]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S56817 S56817]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S34793 S34793]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26978 S26978]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S25968 S25968]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=RDBYIS RDBYIS]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PT0094 PT0094]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0336 JX0336]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I38895 I38895]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D81388 D81388]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D71712 D71712]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D32394 D32394]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C32394 C32394]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B58930 B58930]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B32394 B32394]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56660 A56660]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A45159 A45159]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A42792 A42792]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P35720 P35720]
 
−
** [http://www.uniprot.org/uniprot/Q26266 Q26266]
 
−
** [http://www.uniprot.org/uniprot/P21913 P21913]
 
−
** [http://www.uniprot.org/uniprot/Q9ZZR2 Q9ZZR2]
 
−
** [http://www.uniprot.org/uniprot/P21911 P21911]
 
−
** [http://www.uniprot.org/uniprot/Q9ZEA1 Q9ZEA1]
 
−
** [http://www.uniprot.org/uniprot/Q9PI67 Q9PI67]
 
−
** [http://www.uniprot.org/uniprot/P21912 P21912]
 
−
** [http://www.uniprot.org/uniprot/P31040 P31040]
 
−
** [http://www.uniprot.org/uniprot/Q9CQA3 Q9CQA3]
 
−
** [http://www.uniprot.org/uniprot/P21801 P21801]
 
−
** [http://www.uniprot.org/uniprot/P35721 P35721]
 
−
** [http://www.uniprot.org/uniprot/P32420 P32420]
 
−
** [http://www.uniprot.org/uniprot/Q00711 Q00711]
 
−
** [http://www.uniprot.org/uniprot/P47052 P47052]
 
−
** [http://www.uniprot.org/uniprot/P48932 P48932]
 
−
** [http://www.uniprot.org/uniprot/P48934 P48934]
 
−
** [http://www.uniprot.org/uniprot/P48935 P48935]
 
−
** [http://www.uniprot.org/uniprot/P48933 P48933]
 
−
** [http://www.uniprot.org/uniprot/P73723 P73723]
 
−
** [http://www.uniprot.org/uniprot/P80481 P80481]
 
−
** [http://www.uniprot.org/uniprot/P80482 P80482]
 
−
** [http://www.uniprot.org/uniprot/P80480 P80480]
 
−
** [http://www.uniprot.org/uniprot/Q9T584 Q9T584]
 
−
** [http://www.uniprot.org/uniprot/P80479 P80479]
 
−
** [http://www.uniprot.org/uniprot/P80478 P80478]
 
−
** [http://www.uniprot.org/uniprot/Q09508 Q09508]
 
−
** [http://www.uniprot.org/uniprot/Q59659 Q59659]
 
−
** [http://www.uniprot.org/uniprot/Q9UTJ7 Q9UTJ7]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=succinate dehydrogenase (Complex II) flavoprotein subunit precursor}}
+
{{#set: ec number=EC-1.14.14.1}}
−
{{#set: ec number=EC-1.3.5.1}}
+
{{#set: gene associated=CHC_T00008302001_1|CHC_T00008799001_1|CHC_T00009144001_1}}
−
{{#set: gene associated=CHC_T00001817001_1|CHC_T00008943001|CHC_T00007286001_1|CHC_T00006990001_1|CHC_T00008943001_1|CHC_T00007584001_1}}
+
{{#set: in pathway=PWY-5451|PWY-7466}}
−
{{#set: in pathway=PWY0-1353|PWY-3781|PWY-7279|PWY0-1329|PWY-4302|PWY66-398}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:54, 9 January 2019

Reaction RXN-8630

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5451, acetone degradation I (to methylglyoxal): PWY-5451
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7466, acetone degradation III (to propane-1,2-diol): PWY-7466
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-8630&oldid=22440"