Difference between revisions of "RXN-9540"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9868 RXN-9868] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9868 RXN-9868] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9540 RXN-9540] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3-oxo-palmitoyl-[acyl-carrier protein] reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase
 +
** 3-oxoacyl-(acyl-carrier-protein) reductase
 +
** beta-ketoacyl reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.45 EC-3.1.1.45]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-10608]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-294]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[3-oxo-palmitoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-Hydroxypalmitoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 trans-dienelactone[c] '''+''' 1 H2O[c] '''=>''' 1 2-maleylacetate[c] '''+''' 1 H+[c]
+
** 1 a 3-oxo-palmitoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxypalmitoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00004692001_1]]
+
* Gene: [[CHC_T00008557001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008496001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008517001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008477001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6089]], 3-chlorocatechol degradation I (ortho): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6089 PWY-6089]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''22''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06838 R06838]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.1.1.45}}
+
{{#set: common name=3-oxo-palmitoyl-[acyl-carrier protein] reductase}}
−
{{#set: gene associated=CHC_T00004692001_1}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase}}
−
{{#set: in pathway=PWY-6089}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein) reductase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=beta-ketoacyl reductase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: ec number=EC-2.3.1.85}}
 +
{{#set: ec number=EC-1.1.1.100}}
 +
{{#set: gene associated=CHC_T00008557001|CHC_T00008496001|CHC_T00008517001_1|CHC_T00008477001}}
 +
{{#set: in pathway=PWY-5994|PWY-5971}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:58, 9 January 2019

Reaction RXN-9540

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-palmitoyl-[acyl-carrier protein] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase
    • 3-oxoacyl-(acyl-carrier-protein) reductase
    • beta-ketoacyl reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 22 reactions found over 31 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-palmitoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.
"3-oxoacyl-[acyl-carrier-protein] reductase" cannot be used as a page name in this wiki.






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