Difference between revisions of "KDOTRANS-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYL-SEROTONIN N-ACETYL-SEROTONIN] == * smiles: ** CC(=O)NCCC2(=CNC1(=C(C=C(O)C=C1)2)) * in...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYL-SEROTONIN N-ACETYL-SEROTONIN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] ==
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* smiles:
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* direction:
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** CC(=O)NCCC2(=CNC1(=C(C=C(O)C=C1)2))
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=MVAWJSIDNICKHF-UHFFFAOYSA-N
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** [http://enzyme.expasy.org/EC/2.4.99.12 EC-2.4.99.12]
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* common name:
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** N-acetyl-serotonin
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* molecular weight:
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** 218.255   
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* Synonym(s):
 
* Synonym(s):
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** N-acetyl-5-hydroxytryptamine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-11057]]
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** 1 [[LIPID-IV-A]][c] '''+''' 1 [[CMP-KDO]][c] '''=>''' 1 [[KDO-LIPID-IVA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CMP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 lipid IVA[c] '''+''' 1 CMP-3-deoxy-β-D-manno-octulosonate[c] '''=>''' 1 α-Kdo-(2→6)-lipid IVA[c] '''+''' 1 H+[c] '''+''' 1 CMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00003262001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-7675]], Kdo transfer to lipid IVA II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7675 PWY-7675]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I: [http://metacyc.org/META/NEW-IMAGE?object=KDOSYN-PWY KDOSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 1210-83-9
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* RHEA:
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* DRUGBANK : DB04275
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28066 28066]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=903 903]
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** [http://www.genome.jp/dbget-bin/www_bget?R04658 R04658]
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* HMDB : HMDB01238
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.4.99.12}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00978 C00978]
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{{#set: gene associated=CHC_T00003262001_1}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-7675|KDOSYN-PWY}}
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** [http://www.chemspider.com/Chemical-Structure.879.html 879]
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{{#set: reconstruction category=orthology}}
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* CHEBI:
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17697 17697]
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{{#set: reconstruction tool=pantograph}}
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* METABOLIGHTS : MTBLC17697
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{{#set: smiles=CC(=O)NCCC2(=CNC1(=C(C=C(O)C=C1)2))}}
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{{#set: inchi key=InChIKey=MVAWJSIDNICKHF-UHFFFAOYSA-N}}
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{{#set: common name=N-acetyl-serotonin}}
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{{#set: molecular weight=218.255    }}
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{{#set: common name=N-acetyl-5-hydroxytryptamine}}
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{{#set: produced by=RXN-11057}}
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Latest revision as of 17:30, 9 January 2019

Reaction KDOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 lipid IVA[c] + 1 CMP-3-deoxy-β-D-manno-octulosonate[c] => 1 α-Kdo-(2→6)-lipid IVA[c] + 1 H+[c] + 1 CMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7675, Kdo transfer to lipid IVA II: PWY-7675
    • 1 reactions found over 2 reactions in the full pathway
  • KDOSYN-PWY, Kdo transfer to lipid IVA I: KDOSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=KDOTRANS-RXN&oldid=23180"