Difference between revisions of "TRNA-CHARGING-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] ==
 +
* common name:
 +
** tRNA charging
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** gallate biosynthesis
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''1''' reaction(s) found
+
'''21''' reactions found over '''21''' reactions in the full pathway
−
** [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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* [[ALANINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00008489001]]
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*** [[CHC_T00009548001]]
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*** [[CHC_T00008489001_1]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[ARGININE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00010186001]]
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*** [[CHC_T00010186001_1]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[CHC_T00008942001_1]]
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*** [[CHC_T00008849001_1]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[ASPARTATE--TRNA-LIGASE-RXN]]
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** 7 associated gene(s):
 +
*** [[CHC_T00004955001_1]]
 +
*** [[CHC_T00004944001_1]]
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*** [[CHC_T00003476001_1]]
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*** [[CHC_T00009433001_1]]
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*** [[CHC_T00010226001_1]]
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*** [[CHC_T00010226001]]
 +
*** [[CHC_T00009433001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[CYSTEINE--TRNA-LIGASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009398001_1]]
 +
*** [[CHC_T00009398001]]
 +
*** [[CHC_T00002892001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[GLURS-RXN]]
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** 2 associated gene(s):
 +
*** [[CHC_T00002361001_1]]
 +
*** [[CHC_T00008453001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00001673001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[GLYCINE--TRNA-LIGASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00004794001_1]]
 +
*** [[CHC_T00007645001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[HISTIDINE--TRNA-LIGASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_255]]
 +
*** [[CHC_T00004806001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009388001_1]]
 +
*** [[CHC_T00009388001]]
 +
*** [[CHC_T00005914001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[LEUCINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00009574001_1]]
 +
*** [[CHC_T00004313001_1]]
 +
*** [[CHC_T00009574001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[LYSINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00008917001]]
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*** [[CHC_T00008917001_1]]
 +
*** [[CHC_T00008735001_1]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[METHIONINE--TRNA-LIGASE-RXN]]
 +
** 4 associated gene(s):
 +
*** [[CHC_T00007020001_1]]
 +
*** [[CHC_T00006241001_1]]
 +
*** [[CHC_T00009091001]]
 +
*** [[CHC_T00009091001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
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** 6 associated gene(s):
 +
*** [[CHC_T00001598001_1]]
 +
*** [[CHC_T00002604001_1]]
 +
*** [[CHC_270]]
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*** [[CHC_T00009560001_1]]
 +
*** [[CHC_T00009560001]]
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*** [[CHC_T00003422001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PROLINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
 +
*** [[CHC_T00008394001]]
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*** [[CHC_T00008394001_1]]
 +
*** [[CHC_T00009364001_1]]
 +
*** [[CHC_T00009364001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-16165]]
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** 4 associated gene(s):
 +
*** [[CHC_T00006241001_1]]
 +
*** [[CHC_T00007020001_1]]
 +
*** [[CHC_T00009091001_1]]
 +
*** [[CHC_T00009091001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[SERINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00009407001]]
 +
*** [[CHC_T00009407001_1]]
 +
*** [[CHC_T00009366001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[THREONINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00009393001_1]]
 +
*** [[CHC_T00008771001_1]]
 +
*** [[CHC_T00008771001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00010058001_1]]
 +
*** [[CHC_T00002342001_1]]
 +
*** [[CHC_T00010058001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[TYROSINE--TRNA-LIGASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009128001_1]]
 +
*** [[CHC_T00009345001]]
 +
*** [[CHC_T00009345001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[VALINE--TRNA-LIGASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00005897001_1]]
 +
*** [[CHC_T00001234001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''2''' reaction(s) not found
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12131 RXN-12131]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12132 RXN-12132]
 
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
* ECOCYC:
−
{{#set: taxonomic range=TAX-33090}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
{{#set: common name=tRNA charging}}
 +
{{#set: taxonomic range=TAX-2759}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=gallate biosynthesis}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: reaction found=1}}
+
{{#set: reaction found=21}}
−
{{#set: reaction not found=2}}
+
{{#set: total reaction=21}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 15:02, 9 January 2019

Pathway TRNA-CHARGING-PWY

Reaction(s) found

21 reactions found over 21 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=TRNA-CHARGING-PWY&oldid=19731"