Difference between revisions of "RIBONUCLEOSIDE-DIP-REDUCTII-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-465 CPD-465] == * smiles: ** CC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(C)C)C)(C1COP(OP([O-])([O-])=...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-465 CPD-465] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTII-RXN RIBONUCLEOSIDE-DIP-REDUCTII-RXN] ==
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* smiles:
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* direction:
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** CC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(C)C)C)(C1COP(OP([O-])([O-])=O)([O-])=O)C))C)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ATZKAUGGNMSCCY-VYCBRMPGSA-K
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* common name:
 
* common name:
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** presqualene diphosphate
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** ribonucleoside-diphosphate reductase beta chain
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* molecular weight:
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** ribonucleoside-diphosphate reductase alpha chain
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** 583.66   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-13724]]
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* With identifiers:
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* [[RXN66-281]]
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** 1 [[Reduced-NrdH-Proteins]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[DCDP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-12263]]
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** 1 a reduced NrdH glutaredoxin-like protein[c] '''+''' 1 CDP[c] '''=>''' 1 H2O[c] '''+''' 1 an oxidized NrdH glutaredoxin-like protein[c] '''+''' 1 dCDP[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008926001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008864001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008926001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008864001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''12''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03428 C03428]
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{{#set: common name=ribonucleoside-diphosphate reductase beta chain}}
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* CHEBI:
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{{#set: common name=ribonucleoside-diphosphate reductase alpha chain}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57310 57310]
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{{#set: ec number=EC-1.17.4.1}}
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* METABOLIGHTS : MTBLC57310
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{{#set: gene associated=CHC_T00008926001|CHC_T00008864001|CHC_T00008926001_1|CHC_T00008864001_1}}
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* PUBCHEM:
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{{#set: in pathway=PWY0-166}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244634 25244634]
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{{#set: reconstruction category=orthology|annotation}}
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* HMDB : HMDB01278
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: smiles=CC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(C)C)C)(C1COP(OP([O-])([O-])=O)([O-])=O)C))C)C)C}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=ATZKAUGGNMSCCY-VYCBRMPGSA-K}}
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{{#set: common name=presqualene diphosphate}}
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{{#set: molecular weight=583.66    }}
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{{#set: consumed by=RXN-13724|RXN66-281}}
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{{#set: produced by=RXN-12263}}
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Latest revision as of 17:36, 9 January 2019

Reaction RIBONUCLEOSIDE-DIP-REDUCTII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate reductase beta chain
    • ribonucleoside-diphosphate reductase alpha chain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RIBONUCLEOSIDE-DIP-REDUCTII-RXN&oldid=21985"