Difference between revisions of "3-OXOACYL-ACP-SYNTH-BASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene CHC_T00001061001_1 == * Synonym(s): == Reactions associated == * DNA-DIRECTED-DNA-POLYMERASE-RXN ** pantograph-galdieria.sulphuraria ==...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene CHC_T00001061001_1 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** Beta-ketoacyl synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* With identifiers:
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[ACETYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[ACP]][c]
−
== Pathways associated ==
+
* With common name(s):
 +
** 1 a malonyl-[acp][c] '''+''' 1 an acetyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 an acetoacetyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00009465001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00009465001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
== Pathways ==
 +
* [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5966]], fatty acid biosynthesis initiation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5965]], fatty acid biosynthesis initiation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P23902 P23902]
 +
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
 +
** [http://www.uniprot.org/uniprot/P49327 P49327]
 +
** [http://www.uniprot.org/uniprot/P43710 P43710]
 +
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
 +
** [http://www.uniprot.org/uniprot/O67612 O67612]
 +
** [http://www.uniprot.org/uniprot/P20582 P20582]
 +
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
 +
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
 +
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
 +
** [http://www.uniprot.org/uniprot/P43711 P43711]
 +
** [http://www.uniprot.org/uniprot/O25284 O25284]
 +
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
 +
** [http://www.uniprot.org/uniprot/O34340 O34340]
 +
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
 +
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
 +
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
 +
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
 +
** [http://www.uniprot.org/uniprot/P41175 P41175]
 +
** [http://www.uniprot.org/uniprot/P31176 P31176]
 +
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
 +
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
 +
** [http://www.uniprot.org/uniprot/P73283 P73283]
 +
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
 +
** [http://www.uniprot.org/uniprot/O64485 O64485]
 +
** [http://www.uniprot.org/uniprot/O65677 O65677]
 +
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
 +
** [http://www.uniprot.org/uniprot/O23738 O23738]
 +
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
 +
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
 +
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
 +
** [http://www.uniprot.org/uniprot/O54440 O54440]
 +
** [http://www.uniprot.org/uniprot/P55338 P55338]
 +
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
 +
** [http://www.uniprot.org/uniprot/P12276 P12276]
 +
** [http://www.uniprot.org/uniprot/P12785 P12785]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Beta-ketoacyl synthase}}
 +
{{#set: ec number=EC-2.3.1.86}}
 +
{{#set: ec number=EC-2.3.1.85}}
 +
{{#set: ec number=EC-2.3.1.41}}
 +
{{#set: gene associated=CHC_T00009465001|CHC_T00009465001_1}}
 +
{{#set: in pathway=FASYN-INITIAL-PWY|PWY-5966|PWY-5965|PWY-7388}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:38, 9 January 2019

Reaction 3-OXOACYL-ACP-SYNTH-BASE-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • FASYN-INITIAL-PWY, superpathway of fatty acid biosynthesis initiation (E. coli): FASYN-INITIAL-PWY
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5966, fatty acid biosynthesis initiation II: PWY-5966
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5965, fatty acid biosynthesis initiation III: PWY-5965
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=3-OXOACYL-ACP-SYNTH-BASE-RXN&oldid=20594"