Difference between revisions of "GLUTAMIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-dependent...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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* common name:
 
* common name:
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** tetrapyrrole biosynthesis I (from glutamate)
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** ferredoxin-dependent glutamate synthase
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** carbamoyl phosphate synthase small subunit
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** GMP synthase (glutamine-hydrolysing)
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
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** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''6''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[GLURS-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[GLUTRNAREDUCT-RXN]]
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* With common name(s):
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* [[GSAAMINOTRANS-RXN]]
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** 1 H2O[c] '''+''' 1 L-glutamine[c] '''=>''' 1 L-glutamate[c] '''+''' 1 ammonium[c]
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* [[OHMETHYLBILANESYN-RXN]]
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* [[PORPHOBILSYNTH-RXN]]
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== Genes associated with this reaction  ==
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* [[UROGENIIISYN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[CHC_T00008596001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00000667001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009427001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_1080]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00007798001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010056001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009427001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_70]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00002449001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00000298001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00004458001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways ==
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* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15889 15889]
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{{#set: taxonomic range=TAX-33682}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1117}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
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{{#set: taxonomic range=TAX-1224}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/P10172 P10172]
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{{#set: taxonomic range=TAX-3398}}
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** [http://www.uniprot.org/uniprot/P28492 P28492]
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{{#set: common name=tetrapyrrole biosynthesis I (from glutamate)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=6}}
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{{#set: common name=ferredoxin-dependent glutamate synthase}}
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{{#set: reaction not found=6}}
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{{#set: common name=carbamoyl phosphate synthase small subunit}}
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{{#set: completion rate=100.0}}
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{{#set: common name=GMP synthase (glutamine-hydrolysing)}}
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{{#set: ec number=EC-3.5.1.38}}
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{{#set: ec number=EC-3.5.1.2}}
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{{#set: gene associated=CHC_T00008596001_1|CHC_T00000667001_1|CHC_T00009427001|CHC_1080|CHC_T00007798001_1|CHC_T00010056001_1|CHC_T00009427001_1|CHC_70|CHC_T00002449001_1|CHC_T00000298001_1|CHC_T00004458001_1}}
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{{#set: in pathway=GLUTAMINDEG-PWY|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:50, 23 May 2018

Reaction GLUTAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-dependent glutamate synthase
    • carbamoyl phosphate synthase small subunit
    • GMP synthase (glutamine-hydrolysing)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-glutamine[c] => 1 L-glutamate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GLUTAMIN-RXN&oldid=15442"