Difference between revisions of "F16BDEPHOS-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16BDEPHOS-RXN F16BDEPHOS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** fructose-1,6-bisp...") |
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** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY] |
| − | + | ** '''11''' reactions found over '''12''' reactions in the full pathway | |
| − | + | ||
| − | ** ''' | + | |
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS] | * [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS] | ||
** '''12''' reactions found over '''12''' reactions in the full pathway | ** '''12''' reactions found over '''12''' reactions in the full pathway | ||
| − | |||
| − | |||
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484] | * [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484] | ||
** '''11''' reactions found over '''11''' reactions in the full pathway | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
| − | * [[ | + | * [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] |
| − | ** ''' | + | ** '''6''' reactions found over '''9''' reactions in the full pathway |
| + | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] | ||
| + | ** '''13''' reactions found over '''13''' reactions in the full pathway | ||
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] | * [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] | ||
** '''10''' reactions found over '''12''' reactions in the full pathway | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ||
| + | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11064 11064] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11064 11064] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P09199 P09199] | ** [http://www.uniprot.org/uniprot/P09199 P09199] | ||
| Line 101: | Line 99: | ||
** [http://www.uniprot.org/uniprot/Q07204 Q07204] | ** [http://www.uniprot.org/uniprot/Q07204 Q07204] | ||
** [http://www.uniprot.org/uniprot/P22418 P22418] | ** [http://www.uniprot.org/uniprot/P22418 P22418] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00762 R00762] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=fructose-1,6-bisphosphatase}} | {{#set: common name=fructose-1,6-bisphosphatase}} | ||
| Line 106: | Line 106: | ||
{{#set: ec number=EC-3.1.3.11}} | {{#set: ec number=EC-3.1.3.11}} | ||
{{#set: gene associated=CHC_T00008570001_1|CHC_T00008369001_1|CHC_T00002260001_1|CHC_T00008570001|CHC_T00008537001|CHC_T00008537001_1}} | {{#set: gene associated=CHC_T00008570001_1|CHC_T00008369001_1|CHC_T00002260001_1|CHC_T00008570001|CHC_T00008537001|CHC_T00008537001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=P185-PWY|GLYCOLYSIS|PWY-5484|SUCSYN-PWY|CALVIN-PWY|PWY66-399|GLUCONEO-PWY}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:16, 9 January 2019
Contents
Reaction F16BDEPHOS-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- fructose-1,6-bisphosphatase
- fructose-1,6-bisphosphatase precursor
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 FRUCTOSE-16-DIPHOSPHATE[c] + 1 WATER[c] => 1 FRUCTOSE-6P[c] + 1 Pi[c]
- With common name(s):
- 1 fructose 1,6-bisphosphate[c] + 1 H2O[c] => 1 β-D-fructofuranose 6-phosphate[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008570001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008369001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00002260001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00008570001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008537001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008537001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
Pathways
- P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
- 12 reactions found over 12 reactions in the full pathway
- PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
- 11 reactions found over 11 reactions in the full pathway
- SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
- 6 reactions found over 9 reactions in the full pathway
- CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
- 13 reactions found over 13 reactions in the full pathway
- PWY66-399, gluconeogenesis III: PWY66-399
- 10 reactions found over 12 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
