Difference between revisions of "RXN-16389"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** Beta-ketoacyl synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.1.3.2 EC-2.1.3.2]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACETYL-ACP]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an acetyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 an acetoacetyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
+
** 1 carbamoyl phosphate[c] '''+''' 1 L-aspartate[c] '''<=>''' 1 N-carbamoyl-L-aspartate[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009465001_1]]
+
* [[CHC_T00010056001_1]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
 
−
** [[pantograph]]-[[a.taliana]]
 
−
* [[CHC_T00009465001]]
 
−
** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5965]], fatty acid biosynthesis initiation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965]
+
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5966]], fatty acid biosynthesis initiation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966]
+
* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
+
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
−
*** [[a.taliana]]
 
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[original_genome]]
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20013 20013]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01397 R01397]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23902 P23902]
+
** [http://www.uniprot.org/uniprot/P08955 P08955]
−
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
+
** [http://www.uniprot.org/uniprot/P27708 P27708]
−
** [http://www.uniprot.org/uniprot/P49327 P49327]
+
** [http://www.uniprot.org/uniprot/Q04595 Q04595]
−
** [http://www.uniprot.org/uniprot/P43710 P43710]
+
** [http://www.uniprot.org/uniprot/Q59711 Q59711]
−
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
+
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
−
** [http://www.uniprot.org/uniprot/O67612 O67612]
+
** [http://www.uniprot.org/uniprot/P65616 P65616]
−
** [http://www.uniprot.org/uniprot/P20582 P20582]
+
** [http://www.uniprot.org/uniprot/Q59712 Q59712]
−
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
+
** [http://www.uniprot.org/uniprot/Q9CF79 Q9CF79]
−
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
+
** [http://www.uniprot.org/uniprot/Q58976 Q58976]
−
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
+
** [http://www.uniprot.org/uniprot/P08421 P08421]
−
** [http://www.uniprot.org/uniprot/P43711 P43711]
+
** [http://www.uniprot.org/uniprot/P0A786 P0A786]
−
** [http://www.uniprot.org/uniprot/O25284 O25284]
+
** [http://www.uniprot.org/uniprot/P0A7F3 P0A7F3]
−
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
+
** [http://www.uniprot.org/uniprot/P19936 P19936]
−
** [http://www.uniprot.org/uniprot/O34340 O34340]
+
** [http://www.uniprot.org/uniprot/Q58801 Q58801]
−
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
+
** [http://www.uniprot.org/uniprot/Q9PNJ6 Q9PNJ6]
−
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
+
** [http://www.uniprot.org/uniprot/P05654 P05654]
−
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
+
** [http://www.uniprot.org/uniprot/P0A1Z4 P0A1Z4]
−
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
+
** [http://www.uniprot.org/uniprot/P19910 P19910]
−
** [http://www.uniprot.org/uniprot/P41175 P41175]
+
** [http://www.uniprot.org/uniprot/P07259 P07259]
−
** [http://www.uniprot.org/uniprot/P31176 P31176]
+
** [http://www.uniprot.org/uniprot/P20054 P20054]
−
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
+
** [http://www.uniprot.org/uniprot/P05990 P05990]
−
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
+
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
−
** [http://www.uniprot.org/uniprot/P73283 P73283]
+
** [http://www.uniprot.org/uniprot/Q09027 Q09027]
−
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
+
** [http://www.uniprot.org/uniprot/P49077 P49077]
−
** [http://www.uniprot.org/uniprot/O64485 O64485]
+
** [http://www.uniprot.org/uniprot/Q9S983 Q9S983]
−
** [http://www.uniprot.org/uniprot/O65677 O65677]
+
** [http://www.uniprot.org/uniprot/Q09794 Q09794]
−
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
+
** [http://www.uniprot.org/uniprot/P74163 P74163]
−
** [http://www.uniprot.org/uniprot/O23738 O23738]
+
** [http://www.uniprot.org/uniprot/Q43064 Q43064]
−
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
+
** [http://www.uniprot.org/uniprot/Q43086 Q43086]
−
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
+
** [http://www.uniprot.org/uniprot/Q43087 Q43087]
−
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
+
** [http://www.uniprot.org/uniprot/Q84493 Q84493]
−
** [http://www.uniprot.org/uniprot/O54440 O54440]
+
** [http://www.uniprot.org/uniprot/Q9UAH8 Q9UAH8]
−
** [http://www.uniprot.org/uniprot/P55338 P55338]
+
** [http://www.uniprot.org/uniprot/Q60252 Q60252]
−
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
+
** [http://www.uniprot.org/uniprot/P96174 P96174]
−
** [http://www.uniprot.org/uniprot/P12276 P12276]
+
** [http://www.uniprot.org/uniprot/P96175 P96175]
−
** [http://www.uniprot.org/uniprot/P12785 P12785]
+
{{#set: direction=REVERSIBLE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: ec number=EC-2.1.3.2}}
−
{{#set: common name=Beta-ketoacyl synthase}}
+
{{#set: gene associated=CHC_T00010056001_1}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}}
−
{{#set: ec number=EC-2.3.1.85}}
+
−
{{#set: ec number=EC-2.3.1.41}}
+
−
{{#set: gene associated=CHC_T00009465001_1|CHC_T00009465001}}
+
−
{{#set: in pathway=PWY-5965|PWY-5966|FASYN-INITIAL-PWY|PWY-7388}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: reconstruction source=galdieria.sulphuraria}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 11:00, 18 January 2018

Reaction ASPCARBTRANS-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7790, UMP biosynthesis II: PWY-7790
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7791, UMP biosynthesis III: PWY-7791
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5686, UMP biosynthesis I: PWY-5686
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-16389&oldid=5888"