Difference between revisions of "RXN3O-218"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GPH-RXN GPH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoglycolate phosphatase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GPH-RXN GPH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Phosphoglycolate phosphatase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.18 EC-3.1.3.18]
+
** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-67]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GLYCOLLATE]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[EPISTEROL]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-700]][c] '''+''' 2 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-phosphoglycolate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 glycolate[c]
+
** 2 H+[c] '''+''' 1 oxygen[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 episterol[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 ergosta-5,7,24(28)-trien-3β-ol[c] '''+''' 2 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008946001_1]]
+
* Gene: [[CHC_T00006481001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00008678001]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-arabidopsis_thaliana]]
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-181]], photorespiration: [http://metacyc.org/META/NEW-IMAGE?object=PWY-181 PWY-181]
+
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''9''' reactions found over '''36''' reactions in the full pathway
 +
* [[PWY-6075]], ergosterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6075 PWY-6075]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14369 14369]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33463 33463]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01334 R01334]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07505 R07505]
−
* UNIPROT:
+
** [http://www.genome.jp/dbget-bin/www_bget?R07491 R07491]
−
** [http://www.uniprot.org/uniprot/P40852 P40852]
+
−
** [http://www.uniprot.org/uniprot/P40853 P40853]
+
−
** [http://www.uniprot.org/uniprot/P32662 P32662]
+
−
** [http://www.uniprot.org/uniprot/P73525 P73525]
+
−
** [http://www.uniprot.org/uniprot/O33512 O33512]
+
−
** [http://www.uniprot.org/uniprot/Q9S586 Q9S586]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Phosphoglycolate phosphatase}}
+
{{#set: ec number=EC-1.14.19.20}}
−
{{#set: ec number=EC-3.1.3.18}}
+
{{#set: gene associated=CHC_T00006481001_1}}
−
{{#set: gene associated=CHC_T00008946001_1|CHC_T00008678001}}
+
{{#set: in pathway=PWY-2541|PWY-6075}}
−
{{#set: in pathway=PWY-181}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Revision as of 15:42, 23 May 2018

Reaction RXN3O-218

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2541, plant sterol biosynthesis: PWY-2541
    • 9 reactions found over 36 reactions in the full pathway
  • PWY-6075, ergosterol biosynthesis I: PWY-6075
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN3O-218&oldid=15044"