Difference between revisions of "RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN"

Revision as of 17:03, 23 May 2018

Reaction RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • ribulose bisphosphate carboxylase, small chain
  • ribulose bisphosphate carboxylase, large chain
• ec number:
  • EC-4.1.1.39
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 D-RIBULOSE-15-P2[c] + 1 CARBON-DIOXIDE[c] + 1 WATER[c] => 2 G3P[c] + 2 PROTON[c]
• With common name(s):
  • 1 D-ribulose-1,5-bisphosphate[c] + 1 CO2[c] + 1 H2O[c] => 2 3-phospho-D-glycerate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: CHC_955
  • Source: annotation-original_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: CHC_950
  • Source: annotation-original_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: CHC_T00006620001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus

Pathways

• PWY-5532, nucleoside and nucleotide degradation (archaea): PWY-5532
  • 1 reactions found over 10 reactions in the full pathway
• CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
  • 13 reactions found over 13 reactions in the full pathway
• PWY-5723, Rubisco shunt: PWY-5723
  • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-galdieria.sulphuraria
    • Tool: pantograph
• Category: annotation
  • Source: annotation-original_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 23124
• LIGAND-RXN:
  • R00024
• UNIPROT:
  • P00875
  • P56648
  • Q7M229
  • Q7M1Q6
  • P24672
  • P24673
  • Q9MVE5
  • P48713
  • Q09119
  • P28896
  • Q09125
  • O28685
  • O28635
  • Q9UZD7
  • P20455
  • O58677
  • O31666
  • Q59102
  • P42721
  • Q59462
  • Q02980
  • P27065
  • P04991
  • P00879
  • P24395
  • P28895
  • P05698
  • P26958
  • P14958
  • P31333
  • P00872
  • P19309
  • P19308
  • P19311
  • P19310
  • P19312
  • P00878
  • P28258
  • P19161
  • P19162
  • P07089
  • P08705
  • P28260
  • P26490
  • P16032
  • P16134
  • P16131
  • P16136
  • P16132
  • P16137
  • P16133
  • P16138
  • P24674
  • P26961
  • P26964
  • P24682
  • P17673
  • P26959
  • P69571
  • P26960
  • P24681
  • P26963
  • P24671
  • P69570
  • P16031
  • P24624
  • P25458
  • P12466
  • P00877
  • P08211
  • P00873
  • P08475
  • P22849
  • P22859
  • P22850
  • P22860
  • P24312
  • P08474
  • P06292
  • P16306
  • P14961
  • P10795
  • P10796
  • P10797
  • P10798
  • P27568
  • P22433
  • P00876
  • P11421
  • P11422
  • P69249
  • P69250
  • P26573
  • P19163
  • P19164
  • P25414
  • P24313
  • P23651
  • P23652
  • P04992
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  • P26574
  • P26575
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  • P24683
  • P23011
  • P23012
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  • P27998
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  • P05346
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  • P12089
  • P05347
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  • P18567
  • P00870
  • P00865
  • P12468
  • P24676
  • P24678
  • P24679
  • P24675
  • P24677
  • P26962
  • P10053
  • P05349
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  • P13951
  • P16129
  • P16130
  • P04718
  • P05699
  • P17537
  • P29684
  • P27569
  • Q9S932
  • P26985
  • Q39387
  • Q07087
  • Q07088
  • P30401
  • P14959
  • Q43874
  • P25413
  • Q32753
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  • P31185
  • P69567
  • P69568
  • P69569
  • P31186
  • P31188
  • P37393
  • P37394
  • Q31949
  • Q07049
  • Q39985
  • P34915
  • Q08186
  • Q08184
  • Q08183
  • Q04450
  • Q43746
  • P48711
  • Q31847
  • Q32017
  • Q32250
  • Q32379
  • Q32463
  • Q32788
  • Q32847
  • Q32903
  • Q33040
  • P54205
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  • P48682
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  • Q31992
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  • Q33349
  • Q33359
  • Q33361
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  • Q33345
  • Q33346
  • Q33347
  • Q36352
  • P16881
  • Q42516
  • P48069
  • P48070
  • P48072
  • P48073
  • P48074
  • P48075
  • Q7M2E2
  • Q31795
  • P28399
  • Q37700
  • P51226
  • Q43832
  • P49521
  • P49520
  • O22487
  • Q37247
  • Q41580
  • P18062
  • P41621
  • O65194
  • P50922
  • Q41406