Difference between revisions of "PWY-7185"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAPHTHOATE-SYN-RXN NAPHTHOATE-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** naphthoat...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-II-RXN GTP-CYCLOHYDRO-II-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAPHTHOATE-SYN-RXN NAPHTHOATE-SYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-II-RXN GTP-CYCLOHYDRO-II-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** naphthoate synthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.3.36 EC-4.1.3.36]
+
** [http://enzyme.expasy.org/EC/3.5.4.25 EC-3.5.4.25]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CPD-6972]][c] '''=>''' 1 [[CPD-9925]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[GTP]][c] '''+''' 3 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 4-(2'-carboxyphenyl)-4-oxobutyryl-CoA[c] '''=>''' 1 1,4-dihydroxy-2-naphthoyl-CoA[c] '''+''' 1 H2O[c]
+
** 1 GTP[c] '''+''' 3 H2O[c] '''=>''' 2 H+[c] '''+''' 1 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one[c] '''+''' 1 formate[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008821001]]
+
* [[CHC_T00001056001_1]]
−
** ORIGINAL_GENOME
+
** [[pantograph]]-[[galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008821001_1]]
+
 
** [[pantograph]]-[[a.taliana]]
 
** [[pantograph]]-[[a.taliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
+
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[galdieria.sulphuraria]]
 
*** [[a.taliana]]
 
*** [[a.taliana]]
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[original_genome]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26562 26562]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07263 R07263]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00425 R00425]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9CHK2 Q9CHK2]
+
** [http://www.uniprot.org/uniprot/P0A7I7 P0A7I7]
−
** [http://www.uniprot.org/uniprot/P44960 P44960]
+
** [http://www.uniprot.org/uniprot/Q9PNU4 Q9PNU4]
−
** [http://www.uniprot.org/uniprot/P0ABU0 P0ABU0]
+
** [http://www.uniprot.org/uniprot/O08315 O08315]
−
** [http://www.uniprot.org/uniprot/P23966 P23966]
+
** [http://www.uniprot.org/uniprot/O66679 O66679]
−
** [http://www.uniprot.org/uniprot/Q59464 Q59464]
+
** [http://www.uniprot.org/uniprot/Q9PHU4 Q9PHU4]
−
** [http://www.uniprot.org/uniprot/P73495 P73495]
+
** [http://www.uniprot.org/uniprot/O25484 O25484]
 +
** [http://www.uniprot.org/uniprot/P0A5V0 P0A5V0]
 +
** [http://www.uniprot.org/uniprot/P0A7I8 P0A7I8]
 +
** [http://www.uniprot.org/uniprot/P43525 P43525]
 +
** [http://www.uniprot.org/uniprot/P17620 P17620]
 +
** [http://www.uniprot.org/uniprot/P38066 P38066]
 +
** [http://www.uniprot.org/uniprot/P50139 P50139]
 +
** [http://www.uniprot.org/uniprot/P74104 P74104]
 +
** [http://www.uniprot.org/uniprot/O24019 O24019]
 +
** [http://www.uniprot.org/uniprot/P51695 P51695]
 +
** [http://www.uniprot.org/uniprot/P50855 P50855]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=naphthoate synthase}}
+
{{#set: ec number=EC-3.5.4.25}}
−
{{#set: ec number=EC-4.1.3.36}}
+
{{#set: gene associated=CHC_T00001056001_1}}
−
{{#set: gene associated=CHC_T00008821001|CHC_T00008821001_1}}
+
{{#set: in pathway=PWY-7539|PWY-6168|RIBOSYN2-PWY}}
−
{{#set: in pathway=PWY-5837}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=a.taliana}}
+
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 11:33, 18 January 2018

Reaction GTP-CYCLOHYDRO-II-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7185&oldid=8684"