Difference between revisions of "6PGLUCONDEHYDROG-RXN"

Latest revision as of 10:49, 27 June 2019

Reaction 6PGLUCONDEHYDROG-RXN

• ec number:
  • EC-1.1.1.351
• direction:
  • LEFT-TO-RIGHT
• common name:
  • phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
  • phosphogluconate dehydrogenase (decarboxylating)
• Synonym(s):
  • 6PGD
  • 6-phosphogluconic carboxylase
  • 6-phosphogluconic dehydrogenase
  • Phosphogluconic acid dehydrogenase

Reaction Formula

• With identifiers:
  • 1 CPD-2961[c] + 1 NAD-P-OR-NOP[c] => 1 RIBULOSE-5P[c] + 1 CARBON-DIOXIDE[c] + 1 NADH-P-OR-NOP[c]
• With common name(s):
  • 1 D-gluconate 6-phosphate[c] + 1 NAD(P)+[c] => 1 D-ribulose 5-phosphate[c] + 1 CO2[c] + 1 NAD(P)H[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16040.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g17305.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g5097.t1
  • Source: orthology-saccharina_japonica
• Gene: g12553.t1
  • Source: orthology-saccharina_japonica
• Gene: g3371.t1
  • Source: orthology-saccharina_japonica
• Gene: g6485.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g9910.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g11717.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g3527.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• P122-PWY, heterolactic fermentation: P122-PWY
  • 17 reactions found over 18 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• UNIPROT:
  • P14332
  • P31072
  • Q9CDN4
  • P47506
  • Q9JWS3
  • P43774
  • P12013
  • P41576
  • P00350
  • P00349
  • P52209
  • P41581
  • P41582
  • Q59275
  • P41583
  • Q60254
  • P37754
  • Q59410
  • P52207
  • P70718
  • Q7M451
  • P41572
  • P14062
  • P21577
  • P38720
  • Q40311
  • P53319
  • O81237
  • O81238
  • O81239
  • O22111
  • Q17761
  • O32911
• RHEA:
  • 10117