Difference between revisions of "RXN-12726"

Latest revision as of 17:57, 21 June 2019

Reaction RXN-12726

• ec number:
  • EC-2.5.1.47
• direction:
  • LEFT-TO-RIGHT
• common name:
  • cysteine synthase
  • selenocysteine synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ACETYLSERINE[c] + 1 CPD-678[c] => 1 L-SELENOCYSTEINE[c] + 1 ACET[c] + 1 PROTON[c]
• With common name(s):
  • 1 O-acetyl-L-serine[c] + 1 hydrogen selenide[c] => 1 L-selenocysteine[c] + 1 acetate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g18704.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
• Gene: g9824.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
• Gene: g9965.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18704.t3
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
• Gene: g18704.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
• Gene: g9823.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g3608.t1
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6936, seleno-amino acid biosynthesis: PWY-6936
  • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links