Difference between revisions of "DALADALALIG-RXN"

Latest revision as of 16:57, 21 June 2019

Reaction DALADALALIG-RXN

• ec number:
  • EC-6.3.2.4
• direction:
  • LEFT-TO-RIGHT
• common name:
  • D-alanine-D-alanine ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 2 D-ALANINE[c] + 1 ATP[c] => 1 PROTON[c] + 1 D-ALA-D-ALA[c] + 1 Pi[c] + 1 ADP[c]
• With common name(s):
  • 2 D-alanine[c] + 1 ATP[c] => 1 H+[c] + 1 D-alanyl-D-alanine[c] + 1 phosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16224.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g8360.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g18782.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g8685.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9567.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g14480.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g12762.t1
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6387, UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): PWY-6387
  • 2 reactions found over 8 reactions in the full pathway
• PWY-6386, UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): PWY-6386
  • 2 reactions found over 8 reactions in the full pathway
• PWY-7953, UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing): PWY-7953
  • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links

• UNIPROT:
  • O83676
  • O66806
  • P46805
  • P0A1F0
  • P0A6J8
  • P07862
  • P96612
  • Q9ZDS6
  • Q9CIL5
  • P44405
  • Q9PPC2
  • Q9JSZ9
  • P35660
  • P73632
  • Q9XAK7
  • Q9RLE4
• RHEA:
  • 11224
• LIGAND-RXN:
  • R01150