Difference between revisions of "RXN-9623"

Latest revision as of 10:10, 27 June 2019

Reaction RXN-9623

• ec number:
  • EC-6.2.1.3
• direction:
  • LEFT-TO-RIGHT
• common name:
  • palmitate-CoA ligase
  • long-chain fatty acid-CoA ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 PALMITATE[c] + 1 CO-A[c] + 1 ATP[c] => 1 PALMITYL-COA[c] + 1 PPI[c] + 1 AMP[c]
• With common name(s):
  • 1 palmitate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 palmitoyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g10473.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g16711.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g7072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g17549.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g7800.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g16417.t1
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g16711.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana

Pathways

• PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
  • 31 reactions found over 31 reactions in the full pathway
• PWY-5972, stearate biosynthesis I (animals and fungi): PWY-5972
  • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph

External links

• RHEA:
  • 30754
• LIGAND-RXN:
  • R01280