Difference between revisions of "BIOTIN-CARBOXYL-RXN"

Latest revision as of 10:10, 27 June 2019

Reaction BIOTIN-CARBOXYL-RXN

• ec number:
  • EC-6.3.4.14
• direction:
  • LEFT-TO-RIGHT
• common name:
  • biotin carboxylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 biotin-L-lysine-in-BCCP-dimers[c] + 1 HCO3[c] + 1 ATP[c] => 1 Pi[c] + 1 carboxybiotin-L-lysine-in-BCCP-dimers[c] + 1 ADP[c] + 1 PROTON[c]
• With common name(s):
  • 1 a [biotin carboxyl-carrier-protein dimer]-N6-biotinyl-L-lysine[c] + 1 hydrogencarbonate[c] + 1 ATP[c] => 1 phosphate[c] + 1 a [carboxyl-carrier protein dimer]-N6-carboxybiotinyl-L-lysine[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g18782.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g18781.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g12762.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g8360.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g12763.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g8685.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g16224.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g7387.t1
  • Source: orthology-saccharina_japonica

Pathways

• PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
  • 10 reactions found over 18 reactions in the full pathway
• PWY-5744, glyoxylate assimilation: PWY-5744
  • 5 reactions found over 13 reactions in the full pathway
• PWY0-1264, biotin-carboxyl carrier protein assembly: PWY0-1264
  • 3 reactions found over 4 reactions in the full pathway
• PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
  • 7 reactions found over 13 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links

• UNIPROT:
  • Q06862
  • O67483
  • Q9CHF3
  • Q58626
  • P43873
  • Q9PN09
  • Q9JW07
  • P24182
  • O04983
  • O81273
  • Q42777
  • Q39825
  • O23960
  • O52602
  • Q9R9I4
• RHEA:
  • 13502
• LIGAND-RXN:
  • R04385