Difference between revisions of "OHACYL-COA-DEHYDROG-RXN"

Latest revision as of 10:11, 27 June 2019

Reaction OHACYL-COA-DEHYDROG-RXN

• ec number:
  • EC-1.1.1.35
• direction:
  • LEFT-TO-RIGHT
• common name:
  • 3-hydroxyacyl-CoA dehydrogenase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 NAD[c] + 1 L-3-HYDROXYACYL-COA[c] => 1 PROTON[c] + 1 3-KETOACYL-COA[c] + 1 NADH[c]
• With common name(s):
  • 1 NAD+[c] + 1 a (3S)-3-hydroxyacyl-CoA[c] => 1 H+[c] + 1 a 3-oxoacyl-CoA[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g3527.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g7899.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g10495.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g10833.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g3371.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g3370.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g10495.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g12553.t1
  • Source: orthology-saccharina_japonica
• Gene: g14423.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g17267.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• FAO-PWY, fatty acid β-oxidation I: FAO-PWY
  • 6 reactions found over 7 reactions in the full pathway
• PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
  • 5 reactions found over 5 reactions in the full pathway
• PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
  • 4 reactions found over 6 reactions in the full pathway
• PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
  • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• UNIPROT:
  • P21177
  • Q08426
  • Q53924
  • P07896
  • Q61425
  • Q16836
  • P28793
  • P22414
  • Q7M0E0
  • P34439
  • Q01373
  • P55100
  • Q39659
  • P00348
• PIR:
  • A39592
  • A49613
  • A55045
  • DEPGC
  • DWRTEP
  • JC4210
  • JC4879
  • JX0199
  • S32607
  • S36678
  • S40743
  • S54786
  • S57651
  • S74114
  • T10464
  • T46866
• RHEA:
  • 22433
• LIGAND-RXN:
  • R01778