Difference between revisions of "RXN-10780"

Latest revision as of 10:13, 27 June 2019

Reaction RXN-10780

• ec number:
  • EC-1.2.1.3
• direction:
  • LEFT-TO-RIGHT
• common name:
  • aldehyde dehydrogenase (NAD)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 5-HYDROXYINDOLE_ACETALDEHYDE[c] + 1 NAD[c] + 1 WATER[c] => 1 5-HYDROXYINDOLE_ACETATE[c] + 1 NADH[c] + 2 PROTON[c]
• With common name(s):
  • 1 5-hydroxyindole acetaldehyde[c] + 1 NAD+[c] + 1 H2O[c] => 1 5-hydroxyindole acetate[c] + 1 NADH[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g6074.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g7349.t3
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6884.t1
  • Source: orthology-saccharina_japonica
• Gene: g12290.t1
  • Source: orthology-saccharina_japonica
• Gene: g5640.t1
  • Source: orthology-saccharina_japonica
• Gene: g13104.t1
  • Source: orthology-saccharina_japonica
• Gene: g17510.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g7349.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g17510.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g7349.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g12290.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g7337.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g13273.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6313, serotonin degradation: PWY-6313
  • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• RHEA:
  • 31216
• LIGAND-RXN:
  • R04903