Difference between revisions of "3-OXOACYL-ACP-SYNTH-BASE-RXN"

Latest revision as of 10:13, 27 June 2019

Reaction 3-OXOACYL-ACP-SYNTH-BASE-RXN

• ec number:
  • EC-2.3.1.179
  • EC-2.3.1.41
  • EC-2.3.1.85
  • EC-2.3.1.86
• direction:
  • LEFT-TO-RIGHT
• common name:
  • fatty acid synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ACETYL-ACP[c] + 1 MALONYL-ACP[c] + 1 PROTON[c] => 1 ACP[c] + 1 Acetoacetyl-ACPs[c] + 1 CARBON-DIOXIDE[c]
• With common name(s):
  • 1 an acetyl-[acp][c] + 1 a malonyl-[acp][c] + 1 H+[c] => 1 a holo-[acyl-carrier protein][c] + 1 an acetoacetyl-[acp][c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g9383.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g9620.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g16194.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11832.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11727.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9793.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4673.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g7801.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6627.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g5720.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g7739.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g11727.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g8072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g6672.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6474.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g12855.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g12369.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4145.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4110.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9384.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g10418.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM

Pathways

• PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
  • 7 reactions found over 9 reactions in the full pathway
• PWY-5966, fatty acid biosynthesis initiation II: PWY-5966
  • 2 reactions found over 2 reactions in the full pathway
• PWY-5965, fatty acid biosynthesis initiation III: PWY-5965
  • 1 reactions found over 2 reactions in the full pathway
• FASYN-INITIAL-PWY, superpathway of fatty acid biosynthesis initiation (E. coli): FASYN-INITIAL-PWY
  • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P23902
  • P0A6R0
  • P49327
  • P43710
  • Q9HYR2
  • O67612
  • P20582
  • Q9JT63
  • Q9JW56
  • Q9PMZ6
  • P43711
  • O25284
  • Q9JX65
  • O34340
  • Q9PI63
  • P0AAI5
  • Q07510
  • Q06097
  • P41175
  • P31176
  • Q40027
  • Q40028
  • P73283
  • P0A953
  • O64485
  • O65677
  • Q39310
  • O23738
  • Q41134
  • Q41135
  • Q54208
  • O54440
  • P55338
  • Q9RA31
  • P12276
  • P12785