Difference between revisions of "RXN-15125"

Latest revision as of 10:15, 27 June 2019

Reaction RXN-15125

• direction:
  • LEFT-TO-RIGHT
• common name:
  • L-serine ammonia-lyase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 SER[c] => 1 2-AMINOACRYLATE[c] + 1 WATER[c]
• With common name(s):
  • 1 L-serine[c] => 1 2-aminoprop-2-enoate[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g4726.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g8684.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• PWY-3661, glycine betaine degradation I: PWY-3661
  • 3 reactions found over 7 reactions in the full pathway
• PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
  • 11 reactions found over 24 reactions in the full pathway
• SERDEG-PWY, L-serine degradation: SERDEG-PWY
  • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links

• RHEA:
  • 40664