Difference between revisions of "CHD-RXN"

Latest revision as of 11:15, 27 June 2019

Reaction CHD-RXN

• ec number:
  • EC-1.1.99.1
• direction:
  • REVERSIBLE
• common name:
  • choline dehydrogenase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CHOLINE[c] + 1 Acceptor[c] <=> 1 BETAINE_ALDEHYDE[c] + 1 Donor-H2[c]
• With common name(s):
  • 1 choline[c] + 1 an oxidized electron acceptor[c] <=> 1 betaine aldehyde[c] + 1 a reduced electron acceptor[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g3447.t1
  • Source: orthology-saccharina_japonica
• Gene: g7337.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7349.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g7349.t3
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g7349.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• CHOLINE-BETAINE-ANA-PWY, choline degradation I: CHOLINE-BETAINE-ANA-PWY
  • 2 reactions found over 2 reactions in the full pathway
• BETSYN-PWY, glycine betaine biosynthesis I (Gram-negative bacteria): BETSYN-PWY
  • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P17444
• RHEA:
  • 17436
• LIGAND-RXN:
  • R01025