Difference between revisions of "DTDPGLUCDEHYDRAT-RXN"

Latest revision as of 10:17, 27 June 2019

Reaction DTDPGLUCDEHYDRAT-RXN

• ec number:
  • EC-4.2.1.46
• direction:
  • LEFT-TO-RIGHT
• common name:
  • dTDP-glucose 4,6-dehydratase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 DTDP-D-GLUCOSE[c] => 1 WATER[c] + 1 DTDP-DEOH-DEOXY-GLUCOSE[c]
• With common name(s):
  • 1 dTDP-α-D-glucose[c] => 1 H2O[c] + 1 dTDP-4-dehydro-6-deoxy-α-D-glucopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g14530.t1
  • Source: orthology-saccharina_japonica
• Gene: g5058.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g6427.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7440, dTDP-β-L-4-epi-vancosamine biosynthesis: PWY-7440
  • 1 reactions found over 8 reactions in the full pathway
• PWY-6953, dTDP-3-acetamido-α-D-fucose biosynthesis: PWY-6953
  • 1 reactions found over 5 reactions in the full pathway
• PWY-7104, dTDP-L-megosamine biosynthesis: PWY-7104
  • 1 reactions found over 8 reactions in the full pathway
• PWY-6942, dTDP-D-desosamine biosynthesis: PWY-6942
  • 1 reactions found over 6 reactions in the full pathway
• PWY-7657, dTDP-β-L-digitoxose biosynthesis: PWY-7657
  • 1 reactions found over 7 reactions in the full pathway
• PWY-7414, dTDP-α-D-mycaminose biosynthesis: PWY-7414
  • 1 reactions found over 5 reactions in the full pathway
• PWY-6976, dTDP-L-mycarose biosynthesis: PWY-6976
  • 1 reactions found over 7 reactions in the full pathway
• PWY-7312, dTDP-D-β-fucofuranose biosynthesis: PWY-7312
  • 1 reactions found over 4 reactions in the full pathway
• PWY-7318, dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: PWY-7318
  • 1 reactions found over 5 reactions in the full pathway
• PWY-6974, dTDP-L-olivose biosynthesis: PWY-6974
  • 1 reactions found over 7 reactions in the full pathway
• PWY-7688, dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: PWY-7688
  • 1 reactions found over 6 reactions in the full pathway
• PWY-7316, dTDP-N-acetylviosamine biosynthesis: PWY-7316
  • 1 reactions found over 4 reactions in the full pathway
• PWY-7301, dTDP-4-O-demethyl-β-L-noviose biosynthesis: PWY-7301
  • 2 reactions found over 5 reactions in the full pathway
• PWY-7814, dTDP-L-daunosamine biosynthesis: PWY-7814
  • 2 reactions found over 6 reactions in the full pathway
• PWY-6973, dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: PWY-6973
  • 1 reactions found over 9 reactions in the full pathway
• PWY-6808, dTDP-D-forosamine biosynthesis: PWY-6808
  • 1 reactions found over 9 reactions in the full pathway
• PWY-3221, dTDP-L-rhamnose biosynthesis II: PWY-3221
  • 1 reactions found over 3 reactions in the full pathway
• DTDPRHAMSYN-PWY, dTDP-L-rhamnose biosynthesis I: DTDPRHAMSYN-PWY
  • 3 reactions found over 4 reactions in the full pathway
• PWY-7315, dTDP-N-acetylthomosamine biosynthesis: PWY-7315
  • 1 reactions found over 4 reactions in the full pathway
• PWY-7413, dTDP-6-deoxy-α-D-allose biosynthesis: PWY-7413
  • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • Q9R5L1
  • P44914
  • P29782
  • P27830
  • P55294
  • Q9S642
  • P37759
  • P26391
  • Q59626
  • P39630
  • P37777
  • P37761
  • Q54144
  • Q56173
  • Q55420
  • P55293
  • O66249
  • Q9RMC4
  • O08246
  • Q9RR28
  • Q9SMJ5
• RHEA:
  • 17221
• LIGAND-RXN:
  • R06513