Difference between revisions of "RXN-18301"

Latest revision as of 10:17, 27 June 2019

Reaction RXN-18301

• ec number:
  • EC-2.8.2.11
• direction:
  • LEFT-TO-RIGHT
• common name:
  • β-galactosyl-N-acylsphingosine sulfotransferase
  • galactosylceramide sulfotransferase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 PAPS[c] + 1 A-GALACTOSYLCERAMIDE[c] => 1 galactosylceramide-sulfate[c] + 1 3-5-ADP[c] + 1 PROTON[c]
• With common name(s):
  • 1 3'-phosphoadenylyl-sulfate[c] + 1 a β-D-galactosyl-N-acylsphingosine[c] => 1 a galactosylceramide sulfate[c] + 1 adenosine 3',5'-bisphosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16983.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g15714.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g9326.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g14345.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g13332.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g9321.t1
  • Source: orthology-saccharina_japonica
• Gene: g9326.t1
  • Source: orthology-saccharina_japonica
• Gene: g9321.t2
  • Source: orthology-saccharina_japonica
• Gene: g14009.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g7804.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g3738.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g9321.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g9321.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g3348.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7840, gala-series glycosphingolipids biosynthesis: PWY-7840
  • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links