Difference between revisions of "DTDPKIN-RXN"

Latest revision as of 10:18, 27 June 2019

Reaction DTDPKIN-RXN

• ec number:
  • EC-2.7.4.6
• direction:
  • LEFT-TO-RIGHT
• common name:
  • nucleoside diphosphate kinase
  • dTDP kinase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 TDP[c] + 1 ATP[c] => 1 TTP[c] + 1 ADP[c]
• With common name(s):
  • 1 dTDP[c] + 1 ATP[c] => 1 dTTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g7983.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g9126.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g5829.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g5721.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4257.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g12066.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: g8993.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g5829.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g16942.t1
  • Source: orthology-saccharina_japonica
• Gene: g3959.t1
  • Source: orthology-saccharina_japonica
• Gene: g16067.t1
  • Source: orthology-saccharina_japonica
• Gene: g11360.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g15717.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g8846.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g15513.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM

Pathways

• PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
  • 6 reactions found over 7 reactions in the full pathway
• PWY-7197, pyrimidine deoxyribonucleotide phosphorylation: PWY-7197
  • 4 reactions found over 4 reactions in the full pathway
• PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
  • 14 reactions found over 17 reactions in the full pathway
• PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II: PWY-7187
  • 6 reactions found over 7 reactions in the full pathway
• PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
  • 9 reactions found over 9 reactions in the full pathway
• PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
  • 8 reactions found over 9 reactions in the full pathway
• PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
  • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• RHEA:
  • 27683
• LIGAND-RXN:
  • R02093