Difference between revisions of "1.14.11.2-RXN"

Latest revision as of 10:22, 27 June 2019

Reaction 1.14.11.2-RXN

• ec number:
  • EC-1.14.11.2
• direction:
  • LEFT-TO-RIGHT
• common name:
  • procollagen-proline 4-dioxygenase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 2-KETOGLUTARATE[c] + 1 OXYGEN-MOLECULE[c] + 1 PROCOLLAGEN-L-PROLINE[c] => 1 CPD-6321[c] + 1 SUC[c] + 1 CARBON-DIOXIDE[c]
• With common name(s):
  • 1 2-oxoglutarate[c] + 1 oxygen[c] + 1 a [procollagen]-L-proline[c] => 1 a [procollagen] trans 4-hyroxy-L-proline[c] + 1 succinate[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g7738.t1
  • Source: orthology-saccharina_japonica
• Gene: g7943.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g11879.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9417.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9076.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g8292.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4820.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g6472.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9845.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g11852.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9572.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g6279.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9845.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g3344.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g9572.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g12354.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g17275.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g13061.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g3344.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7894, procollagen hydroxylation and glycosylation: PWY-7894
  • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P21195
  • Q10576
  • P16924
  • P13674
  • P05307
  • P09102
  • P07237
  • Q922C8
  • P04785
  • P54001
• RHEA:
  • 18946
• LIGAND-RXN:
  • R03219