Difference between revisions of "TRANSALDOL-RXN"

Latest revision as of 10:26, 27 June 2019

Reaction TRANSALDOL-RXN

• ec number:
  • EC-2.2.1.2
• direction:
  • REVERSIBLE
• common name:
  • transaldolase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 GAP[c] + 1 D-SEDOHEPTULOSE-7-P[c] <=> 1 FRUCTOSE-6P[c] + 1 ERYTHROSE-4P[c]
• With common name(s):
  • 1 D-glyceraldehyde 3-phosphate[c] + 1 D-sedoheptulose 7-phosphate[c] <=> 1 β-D-fructofuranose 6-phosphate[c] + 1 D-erythrose 4-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g6164.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g6164.t3
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g6499.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g6164.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica

Pathways

• P124-PWY, Bifidobacterium shunt: P124-PWY
  • 12 reactions found over 15 reactions in the full pathway
• PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle): PWY-1861
  • 7 reactions found over 9 reactions in the full pathway
• P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
  • 11 reactions found over 12 reactions in the full pathway
• PWY-5723, Rubisco shunt: PWY-5723
  • 10 reactions found over 10 reactions in the full pathway
• NONOXIPENT-PWY, pentose phosphate pathway (non-oxidative branch): NONOXIPENT-PWY
  • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P17441
  • P17440
  • P37837
  • P45055
  • Q9JSU1
  • P0A867
  • Q9PIL5
  • Q58370
  • P34214
  • P0A870
  • P15019
  • P53228
  • P51778
  • P72797
  • O04894
  • P78865
• RHEA:
  • 17056
• LIGAND-RXN:
  • R01827