Difference between revisions of "RXN-9655"

Latest revision as of 10:27, 27 June 2019

Reaction RXN-9655

• ec number:
  • EC-2.3.1.86
  • EC-2.3.1.85
  • EC-4.2.1.59
• direction:
  • LEFT-TO-RIGHT
• common name:
  • fatty acid synthase
  • 3-hydroxydecanoyl-[acp] dehydrase
• Synonym(s):
  • (3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
  • β-hydroxyacyl-ACP dehydrase
  • HDDase
  • β-hydroxyacyl-acyl carrier protein dehydratase
  • FabA
  • β-hydroxydecanoyl thiol ester dehydrase
  • β-hydroxydecanoate dehydrase
  • D-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase

Reaction Formula

• With identifiers:
  • 1 Beta-hydroxydecanoyl-ACPs[c] => 1 Trans-D2-decenoyl-ACPs[c] + 1 WATER[c]
• With common name(s):
  • 1 a (3R)-3-hydroxydecanoyl-[acp][c] => 1 a (2E)-dec-2-enoyl-[acp][c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g7739.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g4673.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11727.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9383.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g8072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11727.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4110.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g12369.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9793.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g7801.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g4145.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g5720.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g9620.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11832.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g16194.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g10418.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6627.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g6474.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g6672.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g12855.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g7189.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
  • 31 reactions found over 31 reactions in the full pathway
• PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
  • 31 reactions found over 31 reactions in the full pathway
• PWY0-862, (5Z)-dodec-5-enoate biosynthesis I: PWY0-862
  • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links