Difference between revisions of "RXN-7984"

Latest revision as of 10:27, 27 June 2019

Reaction RXN-7984

• direction:
  • LEFT-TO-RIGHT
• common name:
  • violaxanthin de-epoxidase
• Synonym(s):
  • VDE

Reaction Formula

• With identifiers:
  • 1 PROTON[c] + 1 CPD1F-133[c] + 1 ASCORBATE[c] => 1 CPD1F-131[c] + 1 L-DEHYDRO-ASCORBATE[c] + 1 WATER[c]
• With common name(s):
  • 1 H+[c] + 1 violaxanthin[c] + 1 L-ascorbate[c] => 1 antheraxanthin[c] + 1 L-dehydro-ascorbate[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g11316.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g4586.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g16187.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g16187.t1
  • Source: orthology-saccharina_japonica

Pathways

• PWY-5945, violaxanthin, antheraxanthin and zeaxanthin interconversion: PWY-5945
  • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph

External links

• RHEA:
  • 15354
• LIGAND-RXN:
  • R07178