Difference between revisions of "RXN-7904"

Latest revision as of 10:30, 27 June 2019

Reaction RXN-7904

• ec number:
  • EC-6.2.1.3
• direction:
  • LEFT-TO-RIGHT
• common name:
  • long-chain fatty acid-CoA ligase
  • acyl-CoA synthetase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Long-Chain-Fatty-Acids[c] + 1 CO-A[c] + 1 ATP[c] => 1 Long-Chain-Acyl-CoAs[c] + 1 PPI[c] + 1 AMP[c]
• With common name(s):
  • 1 a long-chain fatty acid[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 a long-chain acyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16711.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g17549.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16711.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g10473.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7800.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-5885, wax esters biosynthesis II: PWY-5885
  • 2 reactions found over 4 reactions in the full pathway
• PWY-7033, alkane biosynthesis II: PWY-7033
  • 1 reactions found over 3 reactions in the full pathway
• PWY-6873, long chain fatty acid ester synthesis (engineered): PWY-6873
  • 2 reactions found over 4 reactions in the full pathway
• PWY-5143, long-chain fatty acid activation: PWY-5143
  • 1 reactions found over 1 reactions in the full pathway
• PWY-6803, phosphatidylcholine acyl editing: PWY-6803
  • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • O60135
  • Q9X7Z0
  • Q9X7Y5
  • Q9ZBW6
  • Q9T0A0
  • Q9T009
  • Q96338
  • Q96538
  • Q96537
  • O15840
  • O81614
  • P73004
  • P47912
  • Q8JZR0
  • P69452
  • P69451
  • Q02602
  • P30624
  • P33124
  • P33121
  • Q9JYJ7
  • O51539
  • O30039
  • P44446
  • Q9JTK0
  • Q9CHR0
  • Q9YCF0
  • P94547
  • Q9RTR4
  • O83181
  • Q10776
  • Q9RYK3
  • P39002
  • O51162
  • P39518
  • P18163
• PIR:
  • A36275
  • A54901
  • A70117
  • B54901
  • B75585
  • C70762
  • C71361
  • C75364
  • D69649
  • D72605
  • F86707
  • G81798
  • H64041
  • H69274
  • H70173
  • H81068
  • JE0262
  • JX0202
  • JX0205
  • S23052
  • S23467
  • S41589
  • S49487
  • S56060
  • S74984
  • T01875
  • T02834
  • T07928
  • T07929
  • T07944
  • T08182
  • T08904
  • T34994
  • T35430
  • T35513
  • T39766
• RHEA:
  • 15422
• LIGAND-RXN:
  • R00390