Difference between revisions of "RXN-13297"

Latest revision as of 10:31, 27 June 2019

Reaction RXN-13297

• ec number:
  • EC-2.3.1.199
• direction:
  • LEFT-TO-RIGHT
• common name:
  • 3-oxo-lignoceronyl-CoA synthase
  • 3-oxo-arachidoyl-CoA synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-10279[c] + 1 MALONYL-COA[c] + 1 PROTON[c] => 1 CPD-14273[c] + 1 CARBON-DIOXIDE[c] + 1 CO-A[c]
• With common name(s):
  • 1 docosanoyl-CoA[c] + 1 malonyl-CoA[c] + 1 H+[c] => 1 3-oxo-lignoceroyl-CoA[c] + 1 CO2[c] + 1 coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g12369.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g8072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11832.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7739.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g4110.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
  • 14 reactions found over 16 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links