Difference between revisions of "1TRANSKETO-RXN"

Latest revision as of 10:31, 27 June 2019

Reaction 1TRANSKETO-RXN

• ec number:
  • EC-2.2.1.1
• direction:
  • REVERSIBLE
• common name:
  • transketolase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 D-SEDOHEPTULOSE-7-P[c] + 1 GAP[c] <=> 1 RIBOSE-5P[c] + 1 XYLULOSE-5-PHOSPHATE[c]
• With common name(s):
  • 1 D-sedoheptulose 7-phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c] <=> 1 D-ribose 5-phosphate[c] + 1 D-xylulose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g7003.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g4508.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
  • 12 reactions found over 13 reactions in the full pathway
• P21-PWY, pentose phosphate pathway (partial): P21-PWY
  • 3 reactions found over 3 reactions in the full pathway
• P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
  • 11 reactions found over 12 reactions in the full pathway
• P124-PWY, Bifidobacterium shunt: P124-PWY
  • 12 reactions found over 15 reactions in the full pathway
• PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle): PWY-1861
  • 7 reactions found over 9 reactions in the full pathway
• NONOXIPENT-PWY, pentose phosphate pathway (non-oxidative branch): NONOXIPENT-PWY
  • 5 reactions found over 5 reactions in the full pathway
• PWY-5723, Rubisco shunt: PWY-5723
  • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P29401
  • P33570
  • P21725
  • Q58094
  • Q9JTR1
  • Q9CF56
  • P21726
  • P47312
  • Q9PM31
  • P43757
  • Q58092
  • P45694
  • Q52723
  • Q9Z475
  • P34736
  • P33315
  • Q42675
  • Q42676
  • Q42677
  • P46708
  • P75611
  • P73282
  • Q49047
  • O20250
  • O78327
  • Q9URM2
  • Q9RFB7
  • P23254
  • P27302
  • P29277
  • P22976
• RHEA:
  • 10511
• LIGAND-RXN:
  • R01641