Difference between revisions of "2.5.1.32-RXN"

Latest revision as of 10:31, 27 June 2019

Reaction 2.5.1.32-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • geranylgeranyl-diphosphate geranylgeranyltransferase
• Synonym(s):
  • PSase
  • geranylgeranyl-diphosphate geranylgeranyltransferase

Reaction Formula

• With identifiers:
  • 2 GERANYLGERANYL-PP[c] => 1 CPD-464[c] + 1 PPI[c]
• With common name(s):
  • 2 geranylgeranyl diphosphate[c] => 1 prephytoene diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g11610.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7943, lycopadiene biosynthesis: PWY-7943
  • 1 reactions found over 7 reactions in the full pathway
• PWY-6287, neurosporene biosynthesis: PWY-6287
  • 5 reactions found over 5 reactions in the full pathway
• PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): PWY-6475
  • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P53609
  • P37295
  • P22872
  • P53610
  • P53612
  • P17056
  • P49293
• RHEA:
  • 22297
• LIGAND-RXN:
  • R02065