Difference between revisions of "RXN-9839"

Latest revision as of 10:34, 27 June 2019

Reaction RXN-9839

• ec number:
  • EC-5.1.3.37
• direction:
  • LEFT-TO-RIGHT
• common name:
  • mannuronan C-5 epimerase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Poly-beta-D-Mannuronate[c] => 1 ALGINATE[c]
• With common name(s):
  • 1 mannuronan[c] => 1 alginate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16461.t2
  • Source: orthology-saccharina_japonica
• Gene: g7586.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g14573.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4592.t1
  • Source: orthology-saccharina_japonica
• Gene: g12730.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g14782.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g4546.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g17298.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g16461.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g12641.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g13137.t2
  • Source: orthology-ectocarpus_siliculosus
• Gene: g13137.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g14781.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g5090.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4547.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g12728.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g12372.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7585.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g12376.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7557.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g4544.t1
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6073, alginate biosynthesis I (algal): PWY-6073
  • 3 reactions found over 3 reactions in the full pathway
• PWY-6082, alginate biosynthesis II (bacterial): PWY-6082
  • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links