Difference between revisions of "RXN-13441"

Latest revision as of 10:34, 27 June 2019

Reaction RXN-13441

• ec number:
  • EC-2.3.1.199
• direction:
  • LEFT-TO-RIGHT
• common name:
  • 3-oxo-icosatrienoyl-CoA synthase
  • 3-oxo-arachidoyl-CoA synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 MALONYL-COA[c] + 1 LINOLENOYL-COA[c] + 1 PROTON[c] => 1 CPD-14422[c] + 1 CO-A[c] + 1 CARBON-DIOXIDE[c]
• With common name(s):
  • 1 malonyl-CoA[c] + 1 α-linolenoyl-CoA[c] + 1 H+[c] => 1 3-oxo-icosatrienoyl-CoA[c] + 1 coenzyme A[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g11832.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g12369.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7739.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g8072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4110.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
  • 4 reactions found over 7 reactions in the full pathway
• PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
  • 4 reactions found over 7 reactions in the full pathway
• PWY-7619, juniperonate biosynthesis: PWY-7619
  • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links