Difference between revisions of "DNA-DIRECTED-DNA-POLYMERASE-RXN"

Latest revision as of 10:35, 27 June 2019

Reaction DNA-DIRECTED-DNA-POLYMERASE-RXN

• ec number:
  • EC-2.7.7.7
• direction:
  • LEFT-TO-RIGHT
• common name:
  • DNA polymerase
  • DNA-directed DNA polymerase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Deoxy-Ribonucleoside-Triphosphates[c] + 1 DNA-N[c] => 1 PPI[c] + 1 DNA-N[c]
• With common name(s):
  • 1 a 2'-deoxyribonucleoside 5'-triphosphate[c] + 1 DNAn[c] => 1 diphosphate[c] + 1 DNAn[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g8388.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g6039.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7872.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g11153.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g14370.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4693.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g11932.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g8388.t2
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4231.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g10109.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g10551.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g14914.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16421.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g19129.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g12701.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g6087.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g9146.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g10190.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g14914.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g5776.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g11932.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g16389.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g9375.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9334.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g9972.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g3285.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g17211.t4
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g17211.t3
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18335.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g18601.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9971.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g14341.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g4633.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18601.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g15045.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g11045.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4852.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16714.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g16370.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g18473.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g9970.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g14752.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g5551.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g9972.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g9374.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g11811.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g12448.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6755.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g17211.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16492.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g17211.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g11474.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g14620.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g4633.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7981.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g15797.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g16714.t1
  • Source: orthology-saccharina_japonica
• Gene: g13122.t1
  • Source: orthology-saccharina_japonica
• Gene: g3831.t1
  • Source: orthology-saccharina_japonica
• Gene: g13177.t1
  • Source: orthology-saccharina_japonica
• Gene: g3898.t1
  • Source: orthology-saccharina_japonica
• Gene: g10514.t1
  • Source: orthology-saccharina_japonica
• Gene: g16241.t1
  • Source: orthology-saccharina_japonica
• Gene: g6907.t1
  • Source: orthology-saccharina_japonica
• Gene: g13474.t1
  • Source: orthology-saccharina_japonica
• Gene: g18778.t1
  • Source: orthology-saccharina_japonica
• Gene: g15797.t1
  • Source: orthology-saccharina_japonica
• Gene: g9511.t1
  • Source: orthology-saccharina_japonica
• Gene: g4727.t1
  • Source: orthology-saccharina_japonica
• Gene: g18473.t1
  • Source: orthology-saccharina_japonica
• Gene: g11725.t1
  • Source: orthology-saccharina_japonica

Pathways

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P06856
  • P06766
  • P15801
  • P59200
  • P19821
  • P14284
  • P21951
  • P28339
  • P52027
  • P28340
  • P30321
  • P28630
  • P28905
  • Q36586
  • P28632
  • Q23687
  • Q59690
  • P43744
  • O28552
  • O57863
  • Q9PPI9
  • Q9JW44
  • Q9JVX8
  • P05649
  • P27903
  • P33611
  • Q59691
  • P43745
  • O27456
  • Q9CJJ1
  • Q9JV62
  • P47659
  • Q59024
  • Q9JTS1
  • P06538
  • P04495
  • P09854
  • P07918
  • P09252
  • P03198
  • P28857
  • P07917
  • P08546
  • P28858
  • P04293
  • P28859
  • P04292
  • P27172
  • P10479
  • P06225
  • P04415
  • P19822
  • P00581
  • P10443
  • P0A988
  • P06710
  • P00582
  • P09884
  • P18131
  • P0A121
  • P20509
  • Q91EK5
  • P28040
  • P43741
  • O28484
  • P33761
  • Q9V2F4
  • Q9PJA9
  • Q9JTI9
  • Q9JTM2
  • P03680
  • P06950
  • P43746
  • Q58113
  • P13267
  • Q50790
  • Q9V2F3
  • Q9PIG2
  • Q9JWB1
  • Q9CDS1
  • P54098
  • Q9PND8
  • Q9PI56
  • Q9CIG3
  • P43743
  • O27579
  • Q9JVB2
  • Q9CI70
  • P49005
  • Q08880
  • P49004
  • Q62085
  • P43749
  • P03007
  • P29439
  • P30314
  • P95690
  • O00874
  • O50607
  • Q9P9N2
  • Q9P9N1
  • P21189
  • P12899
  • P11292
  • P12898
  • P24024
  • P17192
  • P03160
  • P06275
  • P12900
  • Q66400
  • P13846
  • P17394
  • P17395
  • P17393
  • P17100
  • P03161
  • P03156
  • P03159
  • P03155
  • P03157
  • P31870
  • P30028
  • P17396
  • P17193
  • P24117
  • P19894
  • P22838
  • P21174
  • P30318
  • Q05486
  • Q04957
  • Q01843
  • Q9WT26
  • P15436
  • Q9XMH7
  • P22374
  • Q7M007
  • P20311
  • P09122
  • P30316
  • P27727
  • Q67878
  • Q67882
  • Q95037
  • P30315
  • P24701
  • P26811
  • P30319
  • P33537
  • P26019
  • P30322
  • Q05254
  • Q07635
  • P0ABS8
  • P28631
  • Q81107
  • P61875
  • P34029
  • P43139
  • P52431
  • Q35599
  • P30317
  • Q67952
  • Q52851
  • P27344
  • P33609
  • Q67892
  • P06746
  • Q37971
  • Q38136
  • P0A024
  • P46957
  • P13382
  • P24482
  • O03684
  • Q50313
  • P87744
  • Q56366
  • Q51334
  • Q9YKD1
  • Q9WNS2
  • Q9QAG0
  • Q9QAF7
  • Q9QAF6
  • Q9QAF3
  • Q9IF40
  • Q96846
  • Q67919
  • Q67913
  • Q67874
  • Q8QXQ1
  • Q8QXP7
  • Q8JN15
  • Q8JN11
  • O56655
  • O56654
  • O11885
  • P72856
  • P95979
  • Q55971
  • P73507
  • P46835
  • Q49008
  • Q49056
  • Q49086
  • O36363
  • O68045
  • O48901
  • P47658
  • P46387
  • Q83948
  • Q9YZU3
  • Q9YZS3
  • Q27607
  • O18475
  • Q61493
  • Q94636
  • Q27152
  • Q9YW56
  • O21376
  • P33793
  • O44055
  • O54376
  • Q98207
  • O57191
  • O31096
  • Q9Z618
  • O59835
  • O39272
  • Q9YTQ4
  • P81412
  • P81409
  • P03261
• LIGAND-RXN:
  • R00379