Difference between revisions of "RXN-16418"

Latest revision as of 10:35, 27 June 2019

Reaction RXN-16418

• ec number:
  • EC-6.2.1.3
• direction:
  • LEFT-TO-RIGHT
• common name:
  • long-chain fatty acid-CoA ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 OCTADEC-9-ENE-118-DIOIC-ACID[c] + 1 CO-A[c] + 1 ATP[c] => 1 CPD-17624[c] + 1 PPI[c] + 1 AMP[c]
• With common name(s):
  • 1 α,ω-9Z-octadecenedioate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 ω-carboxy-(9Z)-octadec-9-enoyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16711.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g7800.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g17549.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16711.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g10473.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY-1121, suberin monomers biosynthesis: PWY-1121
  • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links