Difference between revisions of "RXN-14971"

Latest revision as of 10:35, 27 June 2019

Reaction RXN-14971

• ec number:
  • EC-1.3.5.1
• direction:
  • LEFT-TO-RIGHT
• common name:
  • succinate dehydrogenase (ubiquinone)
  • succinate dehydrogenase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ETR-Quinones[c] + 1 SUC[c] => 1 ETR-Quinols[c] + 1 FUM[c]
• With common name(s):
  • 1 an electron-transfer quinone[c] + 1 succinate[c] => 1 an electron-transfer quinol[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g6566.t1
  • Source: orthology-saccharina_japonica
• Gene: g8977.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g3924.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g11063.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g3925.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g4710.t2
  • Source: orthology-saccharina_japonica
• Gene: g9512.t2
  • Source: orthology-saccharina_japonica
• Gene: g10364.t1
  • Source: orthology-saccharina_japonica
• Gene: g7537.t2
  • Source: orthology-saccharina_japonica
• Gene: g11912.t1
  • Source: orthology-saccharina_japonica
• Gene: g9512.t1
  • Source: orthology-saccharina_japonica
• Gene: g4710.t1
  • Source: orthology-saccharina_japonica
• Gene: g7537.t1
  • Source: orthology-saccharina_japonica
• Gene: g10177.t1
  • Source: orthology-saccharina_japonica
• Gene: g10165.t1
  • Source: orthology-saccharina_japonica
• Gene: g13730.t1
  • Source: orthology-saccharina_japonica
• Gene: g10164.t1
  • Source: orthology-saccharina_japonica
• Gene: g9512.t3
  • Source: orthology-saccharina_japonica
• Gene: g7296.t1
  • Source: orthology-saccharina_japonica
• Gene: g10364.t2
  • Source: orthology-saccharina_japonica
• Gene: g7468.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g10905.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g5727.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g13729.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g17302.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g15081.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): PWY-6969
  • 10 reactions found over 12 reactions in the full pathway
• PWY-5690, TCA cycle II (plants and fungi): PWY-5690
  • 8 reactions found over 9 reactions in the full pathway
• PWY-6728, methylaspartate cycle: PWY-6728
  • 12 reactions found over 19 reactions in the full pathway
• TCA, TCA cycle I (prokaryotic): TCA
  • 9 reactions found over 10 reactions in the full pathway
• PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
  • 6 reactions found over 8 reactions in the full pathway
• PWY-7254, TCA cycle VII (acetate-producers): PWY-7254
  • 7 reactions found over 9 reactions in the full pathway
• P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase): P105-PWY
  • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• RHEA:
  • 40524