Difference between revisions of "DUTP-PYROP-RXN"

Latest revision as of 10:36, 27 June 2019

Reaction DUTP-PYROP-RXN

• ec number:
  • EC-3.6.1.23
  • EC-3.6.1.9
• direction:
  • LEFT-TO-RIGHT
• common name:
  • nucleotide diphosphatase
  • deoxyuridine triphosphatase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 DUTP[c] + 1 WATER[c] => 1 PROTON[c] + 1 DUMP[c] + 1 PPI[c]
• With common name(s):
  • 1 dUTP[c] + 1 H2O[c] => 1 H+[c] + 1 dUMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g9029.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g10338.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g14452.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g10233.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g10234.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7274.t1
  • Source: orthology-saccharina_japonica
• Gene: g7790.t1
  • Source: orthology-saccharina_japonica
• Gene: g7274.t2
  • Source: orthology-saccharina_japonica
• Gene: g10233.t1
  • Source: orthology-arabidopsis_thaliana
• Gene: g10454.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7105.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
  • 8 reactions found over 9 reactions in the full pathway
• PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
  • 14 reactions found over 17 reactions in the full pathway
• PWY-7206, pyrimidine deoxyribonucleotides dephosphorylation: PWY-7206
  • 2 reactions found over 3 reactions in the full pathway
• PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II: PWY-7187
  • 6 reactions found over 7 reactions in the full pathway
• PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
  • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• UNIPROT:
  • Q89932
  • P33316
  • O15923
  • Q9PMK9
  • Q9Z9C2
  • Q9JUW1
  • P43792
  • P32518
  • P68635
  • P68634
  • Q76RE7
  • P03195
  • Q89662
  • Q00030
  • P33317
  • Q45920
  • P43058
  • O80091
  • O36404
  • O41033
  • Q9YML1
  • O39251
  • O01934
  • P10234
  • P06968
  • P09254
  • P28892
  • P28893
• RHEA:
  • 10249
• LIGAND-RXN:
  • R02100