Difference between revisions of "RXN-12263"

Latest revision as of 10:36, 27 June 2019

Reaction RXN-12263

• ec number:
  • EC-2.5.1.103
• direction:
  • LEFT-TO-RIGHT
• common name:
  • farnesyl-diphosphate farnesyltransferase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 2 FARNESYL-PP[c] => 1 CPD-465[c] + 1 PPI[c]
• With common name(s):
  • 2 (2E,6E)-farnesyl diphosphate[c] => 1 presqualene diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g12669.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g11610.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6767, 4,4'-diapolycopenedioate biosynthesis: PWY-6767
  • 1 reactions found over 9 reactions in the full pathway
• PWY-6105, botryococcenes and methylated squalene biosynthesis: PWY-6105
  • 2 reactions found over 9 reactions in the full pathway
• PWY-5875, staphyloxanthin biosynthesis: PWY-5875
  • 1 reactions found over 9 reactions in the full pathway
• PWY-7072, hopanoid biosynthesis (bacteria): PWY-7072
  • 1 reactions found over 14 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • O69445
  • P36596
  • O65688
  • O23118
  • O22107
  • Q40472
  • O22106
  • P53800
  • P53799
  • P53798
  • P29704
  • Q04903
  • Q42761
  • Q42760
  • P37268
  • Q02769
• LIGAND-RXN:
  • R00702