Difference between revisions of "FARNESYLTRANSTRANSFERASE-RXN"

Latest revision as of 10:36, 27 June 2019

Reaction FARNESYLTRANSTRANSFERASE-RXN

• ec number:
  • EC-2.5.1.29
• direction:
  • LEFT-TO-RIGHT
• common name:
  • geranylgeranyl diphosphate synthase
  • farnesyltranstransferase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 FARNESYL-PP[c] + 1 DELTA3-ISOPENTENYL-PP[c] => 1 GERANYLGERANYL-PP[c] + 1 PPI[c]
• With common name(s):
  • 1 (2E,6E)-farnesyl diphosphate[c] + 1 isopentenyl diphosphate[c] => 1 geranylgeranyl diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g6290.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9359.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g12669.t1
  • Source: orthology-saccharina_japonica
• Gene: g10765.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11610.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g7763.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6691, plaunotol biosynthesis: PWY-6691
  • 1 reactions found over 3 reactions in the full pathway
• PWY-5120, geranylgeranyl diphosphate biosynthesis: PWY-5120
  • 1 reactions found over 1 reactions in the full pathway
• PWY-7492, paspaline biosynthesis: PWY-7492
  • 1 reactions found over 6 reactions in the full pathway
• PWY-7720, ophiobolin F biosynthesis: PWY-7720
  • 1 reactions found over 3 reactions in the full pathway
• PWY-6659, fusicoccin A biosynthesis: PWY-6659
  • 1 reactions found over 8 reactions in the full pathway
• PWY-7721, methyl phomopsenoate biosynthesis: PWY-7721
  • 2 reactions found over 4 reactions in the full pathway
• PWY-7517, brassicicene C biosynthesis: PWY-7517
  • 1 reactions found over 7 reactions in the full pathway
• PWY-7736, stellatic acid biosynthesis: PWY-7736
  • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph

External links

• UNIPROT:
  • P39464
  • P24322
  • P80042
  • Q12051
  • P95999
  • P48368
  • P93227
  • P93228
  • Q42698
  • Q43133
  • Q42866
  • P54976
• RHEA:
  • 17654
• LIGAND-RXN:
  • R02061