Difference between revisions of "RXN-12460"

Latest revision as of 10:37, 27 June 2019

Reaction RXN-12460

• ec number:
  • EC-3.1.1.29
• direction:
  • LEFT-TO-RIGHT
• common name:
  • L-asparaginyl-tRNAasn hydrolase
  • aminoacyl-tRNA hydrolase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Charged-ASN-tRNAs[c] + 1 WATER[c] => 1 ASN[c] + 1 ASN-tRNAs[c] + 1 PROTON[c]
• With common name(s):
  • 1 an L-asparaginyl-[tRNAAsn][c] + 1 H2O[c] => 1 L-asparagine[c] + 1 tRNAAsn[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g18644.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g3880.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4572.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g6366.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
  • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links