Difference between revisions of "PHENYLALANINE--TRNA-LIGASE-RXN"

Latest revision as of 10:37, 27 June 2019

Reaction PHENYLALANINE--TRNA-LIGASE-RXN

• ec number:
  • EC-6.1.1.20
• direction:
  • LEFT-TO-RIGHT
• common name:
  • phenylalanine-tRNA ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 PHE-tRNAs[c] + 1 PHE[c] + 1 ATP[c] => 1 Charged-PHE-tRNAs[c] + 1 PPI[c] + 1 AMP[c]
• With common name(s):
  • 1 a tRNAPhe[c] + 1 L-phenylalanine[c] + 1 ATP[c] => 1 an L-phenylalanyl-[tRNAPhe][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g6616.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16669.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g12152.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g10867.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9637.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica

Pathways

• TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
  • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P94283
  • Q9ZDB4
  • Q9WZS9
  • Q9PP34
  • P56145
  • O67620
  • O73984
  • Q9Z6R6
  • Q58508
  • P56146
  • O27545
  • O26837
  • O58391
  • O83938
  • P47436
  • O67087
  • O83059
  • O84843
  • Q9UYX3
  • Q9Z7W0
  • Q9PJR8
  • P47437
  • Q9ZKF9
  • Q9UYX2
  • Q9ZKF8
  • Q9JR76
  • Q57911
  • P43819
  • P94282
  • O84481
  • Q9ZDB5
  • Q9WZS8
  • Q9RRX8
  • Q9PP35
  • P43820
  • Q46107
  • P15434
  • Q5SGX1
  • P37984
  • P51346
  • P75563
  • P75564
  • Q55187
  • P95960
  • P95961
  • Q49032
  • P08312
  • P07395
  • O42870
  • O13432
  • Q9GYS8
  • O42849
  • P17921
  • P17922
  • P15625
  • P08425
  • P15624
• RHEA:
  • 19414
• LIGAND-RXN:
  • R03660