Difference between revisions of "DNA-LIGASE-NAD+-RXN"

Latest revision as of 10:37, 27 June 2019

Reaction DNA-LIGASE-NAD+-RXN

• ec number:
  • EC-6.5.1.6
  • EC-6.5.1.2
• direction:
  • LEFT-TO-RIGHT
• common name:
  • DNA ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 3-Hydroxy-Terminated-DNAs[c] + 1 5-Phospho-terminated-DNAs[c] + 1 NAD[c] => 1 PROTON[c] + 1 DNA-N[c] + 1 AMP[c] + 1 NICOTINAMIDE_NUCLEOTIDE[c]
• With common name(s):
  • 1 a [DNA]-3'-hydroxyl[c] + 1 a 5'-phospho-[DNA][c] + 1 NAD+[c] => 1 H+[c] + 1 DNAn[c] + 1 AMP[c] + 1 β-nicotinamide D-ribonucleotide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g4918.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g16056.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P47496
  • Q9PHT0
  • Q9CIE4
  • P43813
  • O31498
  • O25336
  • O51502
  • P15042
  • P28719
  • P49422
  • P78021
  • P72588
  • Q49078
• LIGAND-RXN:
  • R00382