Difference between revisions of "RXN-16021"

Latest revision as of 10:37, 27 June 2019

Reaction RXN-16021

• ec number:
  • EC-4.2.1.134
• direction:
  • LEFT-TO-RIGHT
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-17263[c] => 1 CPD-17264[c] + 1 WATER[c]
• With common name(s):
  • 1 (8Z,11Z,14Z,17Z)-3-hydroxy-icosa-8,11,14,17-tetraenoyl-CoA[c] => 1 (2E,8Z,11Z,14Z,17Z)-icosa-2,8,11,14,17-pentaenoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16356.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g8153.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
  • 5 reactions found over 8 reactions in the full pathway
• PWY-7049, icosapentaenoate biosynthesis II (6-desaturase, mammals): PWY-7049
  • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links