Difference between revisions of "ALANINE--TRNA-LIGASE-RXN"

Latest revision as of 10:37, 27 June 2019

Reaction ALANINE--TRNA-LIGASE-RXN

• ec number:
  • EC-6.1.1.7
• direction:
  • LEFT-TO-RIGHT
• common name:
  • alanine-tRNA ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 L-ALPHA-ALANINE[c] + 1 ALA-tRNAs[c] + 1 ATP[c] => 1 PPI[c] + 1 AMP[c] + 1 Charged-ALA-tRNAs[c]
• With common name(s):
  • 1 L-alanine[c] + 1 a tRNAAla[c] + 1 ATP[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-alanyl-[tRNAAla][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g4470.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g6571.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4469.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g11084.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
  • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P56452
  • O27718
  • O34526
  • P47534
  • O58035
  • Q9PI05
  • Q9JTG4
  • Q57984
  • O51238
  • Q9CEW0
  • O83980
  • Q9X1B6
  • Q9ZJY5
  • O67323
  • Q9ZCA4
  • Q9Z714
  • P49588
  • P43815
  • P50475
  • P24075
  • P27866
  • P35029
  • P40825
  • P75368
  • Q48976
  • P00957
  • P21894
  • O50189
• RHEA:
  • 12541
• LIGAND-RXN:
  • R03038